Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC10.82□□□□□ -0.68
CKS2P33552 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC10.82□□□□□ -0.68
CKS2P33552 KRT18P2-201ENST00000447938 1258 ntBASIC10.82□□□□□ -0.68
CKS2P33552 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC10.82□□□□□ -0.68
CKS2P33552 AC079140.1-201ENST00000508039 487 ntBASIC10.82□□□□□ -0.68
CKS2P33552 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC10.82□□□□□ -0.68
CKS2P33552 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC10.82□□□□□ -0.68
CKS2P33552 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC10.82□□□□□ -0.68
CKS2P33552 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CKS2P33552 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC10.82□□□□□ -0.68
CKS2P33552 CD63-204ENST00000546939 779 ntTSL 3 BASIC10.82□□□□□ -0.68
CKS2P33552 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
CKS2P33552 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS2P33552 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
CKS2P33552 AC091812.2-201ENST00000619081 385 ntBASIC10.82□□□□□ -0.68
CKS2P33552 AL513190.1-201ENST00000621254 727 ntBASIC10.82□□□□□ -0.68
CKS2P33552 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC10.82□□□□□ -0.68
CKS2P33552 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS2P33552 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS2P33552 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC10.82□□□□□ -0.68
CKS2P33552 Z97205.2-201ENST00000564697 1639 ntBASIC10.82□□□□□ -0.68
CKS2P33552 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS2P33552 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS2P33552 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC10.82□□□□□ -0.68
CKS2P33552 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CKS2P33552 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC10.82□□□□□ -0.68
CKS2P33552 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS2P33552 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC10.82□□□□□ -0.68
CKS2P33552 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS2P33552 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CKS2P33552 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CKS2P33552 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
CKS2P33552 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS2P33552 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS2P33552 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS2P33552 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
CKS2P33552 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC10.82□□□□□ -0.68
CKS2P33552 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
CKS2P33552 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC10.82□□□□□ -0.68
CKS2P33552 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CKS2P33552 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS2P33552 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
CKS2P33552 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS2P33552 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS2P33552 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC10.82□□□□□ -0.68
CKS2P33552 AL157996.1-201ENST00000624684 2299 ntBASIC10.82□□□□□ -0.68
CKS2P33552 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
CKS2P33552 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
CKS2P33552 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CKS2P33552 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC10.82□□□□□ -0.68
CKS2P33552 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS2P33552 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS2P33552 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CKS2P33552 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
CKS2P33552 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
CKS2P33552 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CKS2P33552 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC10.81□□□□□ -0.68
CKS2P33552 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS2P33552 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC10.81□□□□□ -0.68
CKS2P33552 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS2P33552 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC10.81□□□□□ -0.68
CKS2P33552 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CKS2P33552 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CKS2P33552 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS2P33552 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS2P33552 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
CKS2P33552 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CKS2P33552 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS2P33552 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
CKS2P33552 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS2P33552 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC10.81□□□□□ -0.68
CKS2P33552 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC10.81□□□□□ -0.68
CKS2P33552 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC10.81□□□□□ -0.68
CKS2P33552 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS2P33552 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC10.81□□□□□ -0.68
CKS2P33552 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS2P33552 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CKS2P33552 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS2P33552 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS2P33552 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC10.81□□□□□ -0.68
CKS2P33552 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC10.81□□□□□ -0.68
CKS2P33552 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS2P33552 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC10.81□□□□□ -0.68
CKS2P33552 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CKS2P33552 PRR29-209ENST00000582540 967 ntTSL 2 BASIC10.81□□□□□ -0.68
CKS2P33552 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
CKS2P33552 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC10.81□□□□□ -0.68
CKS2P33552 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CKS2P33552 AC055717.3-201ENST00000622967 595 ntBASIC10.81□□□□□ -0.68
CKS2P33552 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CKS2P33552 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC10.81□□□□□ -0.68
CKS2P33552 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS2P33552 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
CKS2P33552 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS2P33552 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS2P33552 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
CKS2P33552 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC10.81□□□□□ -0.68
CKS2P33552 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS2P33552 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
CKS2P33552 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms