Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCKBRP32239 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCKBRP32239 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCKBRP32239 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CCKBRP32239 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CCKBRP32239 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.07□□□□□ -0.16
CCKBRP32239 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCKBRP32239 AC008723.1-201ENST00000506922 207 ntBASIC14.07□□□□□ -0.16
CCKBRP32239 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC14.07□□□□□ -0.16
CCKBRP32239 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.07□□□□□ -0.16
CCKBRP32239 MIR3188-201ENST00000583494 85 ntBASIC14.07□□□□□ -0.16
CCKBRP32239 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC14.07□□□□□ -0.16
CCKBRP32239 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.07□□□□□ -0.16
CCKBRP32239 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.07□□□□□ -0.16
CCKBRP32239 AP003419.4-201ENST00000616071 517 ntBASIC14.07□□□□□ -0.16
CCKBRP32239 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.07□□□□□ -0.16
CCKBRP32239 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.07□□□□□ -0.16
CCKBRP32239 AL805961.1-201ENST00000642026 753 ntBASIC14.07□□□□□ -0.16
CCKBRP32239 CYP4F23P-201ENST00000593402 1579 ntBASIC14.07□□□□□ -0.16
CCKBRP32239 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CCKBRP32239 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCKBRP32239 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCKBRP32239 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.07□□□□□ -0.16
CCKBRP32239 AC099063.4-201ENST00000641099 1602 ntBASIC14.07□□□□□ -0.16
CCKBRP32239 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCKBRP32239 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.07□□□□□ -0.16
CCKBRP32239 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCKBRP32239 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
CCKBRP32239 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
CCKBRP32239 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.07□□□□□ -0.16
CCKBRP32239 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCKBRP32239 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCKBRP32239 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCKBRP32239 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCKBRP32239 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.06□□□□□ -0.16
CCKBRP32239 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCKBRP32239 AC007292.2-201ENST00000593524 1812 ntBASIC14.06□□□□□ -0.16
CCKBRP32239 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.06□□□□□ -0.16
CCKBRP32239 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCKBRP32239 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCKBRP32239 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.06□□□□□ -0.16
CCKBRP32239 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.06□□□□□ -0.16
CCKBRP32239 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.06□□□□□ -0.16
CCKBRP32239 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCKBRP32239 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CCKBRP32239 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCKBRP32239 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCKBRP32239 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCKBRP32239 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCKBRP32239 AC023024.2-201ENST00000623561 1993 ntBASIC14.06□□□□□ -0.16
CCKBRP32239 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCKBRP32239 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CCKBRP32239 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCKBRP32239 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCKBRP32239 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCKBRP32239 XBP1P1-201ENST00000436573 652 ntBASIC14.06□□□□□ -0.16
CCKBRP32239 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC14.06□□□□□ -0.16
CCKBRP32239 MBP-227ENST00000526111 581 ntTSL 4 BASIC14.06□□□□□ -0.16
CCKBRP32239 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCKBRP32239 NPM1P43-201ENST00000558669 786 ntBASIC14.06□□□□□ -0.16
CCKBRP32239 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14.06□□□□□ -0.16
CCKBRP32239 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CCKBRP32239 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CCKBRP32239 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCKBRP32239 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.06□□□□□ -0.16
CCKBRP32239 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.06□□□□□ -0.16
CCKBRP32239 AL109837.1-201ENST00000603272 613 ntBASIC14.06□□□□□ -0.16
CCKBRP32239 MIR6769A-201ENST00000617340 73 ntBASIC14.06□□□□□ -0.16
CCKBRP32239 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.06□□□□□ -0.16
CCKBRP32239 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
CCKBRP32239 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCKBRP32239 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCKBRP32239 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCKBRP32239 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.06□□□□□ -0.16
CCKBRP32239 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.06□□□□□ -0.16
CCKBRP32239 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCKBRP32239 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CCKBRP32239 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCKBRP32239 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCKBRP32239 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCKBRP32239 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCKBRP32239 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCKBRP32239 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCKBRP32239 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCKBRP32239 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCKBRP32239 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCKBRP32239 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
CCKBRP32239 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.06□□□□□ -0.16
CCKBRP32239 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCKBRP32239 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CCKBRP32239 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCKBRP32239 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.05□□□□□ -0.16
CCKBRP32239 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.05□□□□□ -0.16
CCKBRP32239 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCKBRP32239 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.05□□□□□ -0.16
CCKBRP32239 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CCKBRP32239 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCKBRP32239 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.05□□□□□ -0.16
CCKBRP32239 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCKBRP32239 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms