Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHC1P29353 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.49□□□□□ -0.25
SHC1P29353 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHC1P29353 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SHC1P29353 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SHC1P29353 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.48□□□□□ -0.25
SHC1P29353 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SHC1P29353 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
SHC1P29353 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SHC1P29353 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SHC1P29353 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SHC1P29353 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SHC1P29353 SALL4P5-201ENST00000419001 1760 ntBASIC13.48□□□□□ -0.25
SHC1P29353 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.48□□□□□ -0.25
SHC1P29353 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SHC1P29353 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.48□□□□□ -0.25
SHC1P29353 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.48□□□□□ -0.25
SHC1P29353 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SHC1P29353 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.48□□□□□ -0.25
SHC1P29353 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SHC1P29353 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SHC1P29353 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.48□□□□□ -0.25
SHC1P29353 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.48□□□□□ -0.25
SHC1P29353 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SHC1P29353 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SHC1P29353 AC007969.1-201ENST00000433675 447 ntBASIC13.48□□□□□ -0.25
SHC1P29353 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.48□□□□□ -0.25
SHC1P29353 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.48□□□□□ -0.25
SHC1P29353 CSF2RBP1-201ENST00000447905 391 ntBASIC13.48□□□□□ -0.25
SHC1P29353 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SHC1P29353 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.48□□□□□ -0.25
SHC1P29353 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.48□□□□□ -0.25
SHC1P29353 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SHC1P29353 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.48□□□□□ -0.25
SHC1P29353 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.48□□□□□ -0.25
SHC1P29353 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.48□□□□□ -0.25
SHC1P29353 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.48□□□□□ -0.25
SHC1P29353 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.48□□□□□ -0.25
SHC1P29353 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SHC1P29353 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SHC1P29353 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.48□□□□□ -0.25
SHC1P29353 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.48□□□□□ -0.25
SHC1P29353 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SHC1P29353 AC087386.2-201ENST00000623212 4637 ntBASIC13.48□□□□□ -0.25
SHC1P29353 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SHC1P29353 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SHC1P29353 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.48□□□□□ -0.25
SHC1P29353 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SHC1P29353 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
SHC1P29353 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.48□□□□□ -0.25
SHC1P29353 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.47□□□□□ -0.25
SHC1P29353 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
SHC1P29353 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SHC1P29353 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SHC1P29353 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHC1P29353 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
SHC1P29353 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHC1P29353 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.47□□□□□ -0.25
SHC1P29353 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.47□□□□□ -0.25
SHC1P29353 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHC1P29353 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
SHC1P29353 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHC1P29353 AHCYP2-201ENST00000430630 1300 ntBASIC13.47□□□□□ -0.25
SHC1P29353 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.47□□□□□ -0.25
SHC1P29353 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHC1P29353 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.47□□□□□ -0.25
SHC1P29353 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHC1P29353 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.47□□□□□ -0.25
SHC1P29353 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHC1P29353 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHC1P29353 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHC1P29353 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SHC1P29353 CD8B2-202ENST00000417670 633 ntBASIC13.47□□□□□ -0.25
SHC1P29353 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.47□□□□□ -0.25
SHC1P29353 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.47□□□□□ -0.25
SHC1P29353 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHC1P29353 AP005482.1-201ENST00000563722 1273 ntBASIC13.47□□□□□ -0.25
SHC1P29353 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.47□□□□□ -0.25
SHC1P29353 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.47□□□□□ -0.25
SHC1P29353 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.47□□□□□ -0.25
SHC1P29353 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.47□□□□□ -0.25
SHC1P29353 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
SHC1P29353 AC073413.1-201ENST00000603927 732 ntBASIC13.47□□□□□ -0.25
SHC1P29353 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHC1P29353 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.47□□□□□ -0.25
SHC1P29353 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
SHC1P29353 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
SHC1P29353 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.47□□□□□ -0.25
SHC1P29353 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHC1P29353 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
SHC1P29353 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SHC1P29353 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SHC1P29353 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.47□□□□□ -0.25
SHC1P29353 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
SHC1P29353 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHC1P29353 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHC1P29353 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SHC1P29353 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
SHC1P29353 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHC1P29353 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms