Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC005332.2-201ENST00000590010 930 ntBASIC18.55■□□□□ 0.56
RXRBP28702 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RXRBP28702 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC18.55■□□□□ 0.56
RXRBP28702 AC245369.8-201ENST00000636589 306 ntBASIC18.55■□□□□ 0.56
RXRBP28702 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RXRBP28702 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RXRBP28702 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RXRBP28702 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RXRBP28702 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.55■□□□□ 0.56
RXRBP28702 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RXRBP28702 TP73-207ENST00000378290 1831 ntTSL 2 BASIC18.55■□□□□ 0.56
RXRBP28702 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC18.55■□□□□ 0.56
RXRBP28702 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RXRBP28702 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RXRBP28702 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RXRBP28702 AC011676.5-201ENST00000624864 2660 ntBASIC18.55■□□□□ 0.56
RXRBP28702 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC18.55■□□□□ 0.56
RXRBP28702 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RXRBP28702 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RXRBP28702 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RXRBP28702 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC18.54■□□□□ 0.56
RXRBP28702 AL031590.1-202ENST00000641466 1737 ntBASIC18.54■□□□□ 0.56
RXRBP28702 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RXRBP28702 CICP13-201ENST00000422015 2789 ntBASIC18.54■□□□□ 0.56
RXRBP28702 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RXRBP28702 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RXRBP28702 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RXRBP28702 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RXRBP28702 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RXRBP28702 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RXRBP28702 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RXRBP28702 MIR766-201ENST00000390223 111 ntBASIC18.54■□□□□ 0.56
RXRBP28702 OR7E155P-201ENST00000412208 1014 ntBASIC18.54■□□□□ 0.56
RXRBP28702 RFNG-202ENST00000429557 994 ntTSL 5 BASIC18.54■□□□□ 0.56
RXRBP28702 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC18.54■□□□□ 0.56
RXRBP28702 SRP9P1-201ENST00000445874 261 ntBASIC18.54■□□□□ 0.56
RXRBP28702 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC18.54■□□□□ 0.56
RXRBP28702 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC18.54■□□□□ 0.56
RXRBP28702 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC18.54■□□□□ 0.56
RXRBP28702 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC18.54■□□□□ 0.56
RXRBP28702 AL031768.1-201ENST00000606542 701 ntBASIC18.54■□□□□ 0.56
RXRBP28702 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RXRBP28702 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RXRBP28702 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.54■□□□□ 0.56
RXRBP28702 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC18.54■□□□□ 0.56
RXRBP28702 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RXRBP28702 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RXRBP28702 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RXRBP28702 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RXRBP28702 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.54■□□□□ 0.56
RXRBP28702 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC18.54■□□□□ 0.56
RXRBP28702 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RXRBP28702 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RXRBP28702 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RXRBP28702 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC18.53■□□□□ 0.56
RXRBP28702 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RXRBP28702 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RXRBP28702 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RXRBP28702 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RXRBP28702 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RXRBP28702 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RXRBP28702 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RXRBP28702 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RXRBP28702 RIBC1-203ENST00000414955 1281 ntTSL 2 BASIC18.53■□□□□ 0.56
RXRBP28702 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC18.53■□□□□ 0.56
RXRBP28702 IQCF4-203ENST00000428561 420 ntBASIC18.53■□□□□ 0.56
RXRBP28702 HLA-W-207ENST00000439514 771 ntBASIC18.53■□□□□ 0.56
RXRBP28702 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC18.53■□□□□ 0.56
RXRBP28702 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC18.53■□□□□ 0.56
RXRBP28702 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC18.53■□□□□ 0.56
RXRBP28702 ALG10-202ENST00000538927 571 ntTSL 5 BASIC18.53■□□□□ 0.56
RXRBP28702 CCND3P2-201ENST00000579393 537 ntBASIC18.53■□□□□ 0.56
RXRBP28702 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC18.53■□□□□ 0.56
RXRBP28702 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC18.53■□□□□ 0.56
RXRBP28702 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RXRBP28702 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RXRBP28702 BX510359.7-201ENST00000619819 630 ntBASIC18.53■□□□□ 0.56
RXRBP28702 DUX4L33-201ENST00000635217 958 ntBASIC18.53■□□□□ 0.56
RXRBP28702 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RXRBP28702 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RXRBP28702 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RXRBP28702 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RXRBP28702 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RXRBP28702 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RXRBP28702 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RXRBP28702 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RXRBP28702 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.52■□□□□ 0.56
RXRBP28702 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RXRBP28702 AC092364.2-201ENST00000596710 2692 ntBASIC18.52■□□□□ 0.56
RXRBP28702 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
RXRBP28702 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RXRBP28702 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RXRBP28702 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.52■□□□□ 0.56
RXRBP28702 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
RXRBP28702 CD8B-202ENST00000349455 849 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RXRBP28702 GULOP-201ENST00000454030 748 ntBASIC18.52■□□□□ 0.56
RXRBP28702 RN7SL677P-201ENST00000466970 319 ntBASIC18.52■□□□□ 0.56
RXRBP28702 BMS1P8-203ENST00000567036 614 ntTSL 3 BASIC18.52■□□□□ 0.56
RXRBP28702 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC18.52■□□□□ 0.56
RXRBP28702 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms