Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.27□□□□□ -0.29
GDF1P27539 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.27□□□□□ -0.29
GDF1P27539 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GDF1P27539 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.27□□□□□ -0.29
GDF1P27539 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13.27□□□□□ -0.29
GDF1P27539 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
GDF1P27539 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC13.27□□□□□ -0.29
GDF1P27539 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
GDF1P27539 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.27□□□□□ -0.29
GDF1P27539 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.27□□□□□ -0.29
GDF1P27539 AC090857.1-201ENST00000527400 390 ntBASIC13.27□□□□□ -0.29
GDF1P27539 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC13.27□□□□□ -0.29
GDF1P27539 AC009779.1-201ENST00000551138 283 ntBASIC13.27□□□□□ -0.29
GDF1P27539 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.27□□□□□ -0.29
GDF1P27539 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GDF1P27539 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.27□□□□□ -0.29
GDF1P27539 SNX12-206ENST00000622259 661 ntTSL 5 BASIC13.27□□□□□ -0.29
GDF1P27539 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC13.27□□□□□ -0.29
GDF1P27539 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
GDF1P27539 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GDF1P27539 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.27□□□□□ -0.29
GDF1P27539 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
GDF1P27539 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GDF1P27539 TUBBP5-203ENST00000508529 1334 ntBASIC13.27□□□□□ -0.29
GDF1P27539 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.27□□□□□ -0.29
GDF1P27539 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
GDF1P27539 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
GDF1P27539 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
GDF1P27539 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.27□□□□□ -0.29
GDF1P27539 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GDF1P27539 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GDF1P27539 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GDF1P27539 TMBIM7P-202ENST00000641474 1516 ntBASIC13.27□□□□□ -0.29
GDF1P27539 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GDF1P27539 AL157791.1-201ENST00000553667 1699 ntBASIC13.27□□□□□ -0.29
GDF1P27539 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.27□□□□□ -0.29
GDF1P27539 AC007686.3-201ENST00000619017 3487 ntBASIC13.27□□□□□ -0.29
GDF1P27539 KHSRPP1-201ENST00000427983 1768 ntBASIC13.27□□□□□ -0.29
GDF1P27539 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GDF1P27539 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
GDF1P27539 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.27□□□□□ -0.29
GDF1P27539 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GDF1P27539 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.27□□□□□ -0.29
GDF1P27539 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
GDF1P27539 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.27□□□□□ -0.29
GDF1P27539 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.27□□□□□ -0.29
GDF1P27539 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.27□□□□□ -0.29
GDF1P27539 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.27□□□□□ -0.29
GDF1P27539 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.27□□□□□ -0.29
GDF1P27539 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.27□□□□□ -0.29
GDF1P27539 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GDF1P27539 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.27□□□□□ -0.29
GDF1P27539 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
GDF1P27539 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.26□□□□□ -0.29
GDF1P27539 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.26□□□□□ -0.29
GDF1P27539 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
GDF1P27539 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GDF1P27539 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GDF1P27539 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
GDF1P27539 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.26□□□□□ -0.29
GDF1P27539 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
GDF1P27539 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
GDF1P27539 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GDF1P27539 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GDF1P27539 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GDF1P27539 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GDF1P27539 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.26□□□□□ -0.29
GDF1P27539 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
GDF1P27539 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
GDF1P27539 RN7SKP214-201ENST00000364208 315 ntBASIC13.26□□□□□ -0.29
GDF1P27539 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GDF1P27539 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GDF1P27539 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.26□□□□□ -0.29
GDF1P27539 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GDF1P27539 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GDF1P27539 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GDF1P27539 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GDF1P27539 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GDF1P27539 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.26□□□□□ -0.29
GDF1P27539 AC078875.1-201ENST00000431907 724 ntBASIC13.26□□□□□ -0.29
GDF1P27539 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.26□□□□□ -0.29
GDF1P27539 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GDF1P27539 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.26□□□□□ -0.29
GDF1P27539 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.26□□□□□ -0.29
GDF1P27539 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GDF1P27539 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
GDF1P27539 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GDF1P27539 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.26□□□□□ -0.29
GDF1P27539 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.26□□□□□ -0.29
GDF1P27539 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
GDF1P27539 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.26□□□□□ -0.29
GDF1P27539 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.26□□□□□ -0.29
GDF1P27539 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.26□□□□□ -0.29
GDF1P27539 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.26□□□□□ -0.29
GDF1P27539 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GDF1P27539 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GDF1P27539 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.26□□□□□ -0.29
GDF1P27539 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
GDF1P27539 AP001505.2-201ENST00000616815 443 ntBASIC13.26□□□□□ -0.29
GDF1P27539 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms