Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.46□□□□□ -0.1
CDH3P22223 Z82170.1-201ENST00000625081 3192 ntBASIC14.46□□□□□ -0.1
CDH3P22223 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.46□□□□□ -0.1
CDH3P22223 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CDH3P22223 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
CDH3P22223 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDH3P22223 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.1
CDH3P22223 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CDH3P22223 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH3P22223 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH3P22223 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH3P22223 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
CDH3P22223 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH3P22223 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH3P22223 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH3P22223 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH3P22223 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH3P22223 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH3P22223 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH3P22223 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH3P22223 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH3P22223 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH3P22223 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH3P22223 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH3P22223 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH3P22223 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH3P22223 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH3P22223 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CDH3P22223 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CDH3P22223 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH3P22223 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH3P22223 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CDH3P22223 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH3P22223 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.45□□□□□ -0.1
CDH3P22223 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.45□□□□□ -0.1
CDH3P22223 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH3P22223 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.45□□□□□ -0.1
CDH3P22223 FAM86HP-204ENST00000513466 959 ntBASIC14.45□□□□□ -0.1
CDH3P22223 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH3P22223 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CDH3P22223 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH3P22223 AC136759.1-202ENST00000530858 2194 ntBASIC14.45□□□□□ -0.1
CDH3P22223 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH3P22223 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
CDH3P22223 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH3P22223 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.45□□□□□ -0.1
CDH3P22223 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.45□□□□□ -0.1
CDH3P22223 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.45□□□□□ -0.1
CDH3P22223 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.45□□□□□ -0.1
CDH3P22223 AC073413.1-201ENST00000603927 732 ntBASIC14.45□□□□□ -0.1
CDH3P22223 ZACNP1-201ENST00000612259 710 ntBASIC14.45□□□□□ -0.1
CDH3P22223 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.45□□□□□ -0.1
CDH3P22223 FGD5P1-202ENST00000614866 2498 ntBASIC14.45□□□□□ -0.1
CDH3P22223 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH3P22223 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH3P22223 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CDH3P22223 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH3P22223 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH3P22223 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CDH3P22223 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.45□□□□□ -0.1
CDH3P22223 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CDH3P22223 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.45□□□□□ -0.1
CDH3P22223 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH3P22223 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH3P22223 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH3P22223 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
CDH3P22223 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
CDH3P22223 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH3P22223 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH3P22223 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH3P22223 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH3P22223 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CDH3P22223 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH3P22223 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
CDH3P22223 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.44□□□□□ -0.1
CDH3P22223 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH3P22223 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDH3P22223 AL023775.1-201ENST00000454907 1746 ntBASIC14.44□□□□□ -0.1
CDH3P22223 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH3P22223 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH3P22223 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CDH3P22223 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH3P22223 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDH3P22223 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.44□□□□□ -0.1
CDH3P22223 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDH3P22223 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CDH3P22223 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH3P22223 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH3P22223 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.44□□□□□ -0.1
CDH3P22223 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDH3P22223 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.44□□□□□ -0.1
CDH3P22223 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH3P22223 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CDH3P22223 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.44□□□□□ -0.1
CDH3P22223 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDH3P22223 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CDH3P22223 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.44□□□□□ -0.1
CDH3P22223 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.44□□□□□ -0.1
CDH3P22223 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
CDH3P22223 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms