Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AC120045.2-201ENST00000567334 178 ntBASIC14.15□□□□□ -0.14
CAPN3P20807 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
CAPN3P20807 AC015936.2-201ENST00000593177 259 ntBASIC14.15□□□□□ -0.14
CAPN3P20807 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CAPN3P20807 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CAPN3P20807 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CAPN3P20807 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CAPN3P20807 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CAPN3P20807 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CAPN3P20807 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CAPN3P20807 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.15□□□□□ -0.14
CAPN3P20807 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.15□□□□□ -0.14
CAPN3P20807 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CAPN3P20807 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.15□□□□□ -0.14
CAPN3P20807 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CAPN3P20807 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CAPN3P20807 AL359183.1-201ENST00000623796 2132 ntBASIC14.15□□□□□ -0.14
CAPN3P20807 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CAPN3P20807 INTS4P2-202ENST00000614726 2019 ntBASIC14.15□□□□□ -0.14
CAPN3P20807 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
CAPN3P20807 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CAPN3P20807 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CAPN3P20807 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CAPN3P20807 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.15□□□□□ -0.14
CAPN3P20807 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CAPN3P20807 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CAPN3P20807 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CAPN3P20807 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CAPN3P20807 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
CAPN3P20807 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.15
CAPN3P20807 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CAPN3P20807 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CAPN3P20807 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.14□□□□□ -0.15
CAPN3P20807 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CAPN3P20807 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.14□□□□□ -0.15
CAPN3P20807 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CAPN3P20807 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
CAPN3P20807 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CAPN3P20807 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CAPN3P20807 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CAPN3P20807 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CAPN3P20807 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CAPN3P20807 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CAPN3P20807 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CAPN3P20807 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CAPN3P20807 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.14□□□□□ -0.15
CAPN3P20807 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CAPN3P20807 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CAPN3P20807 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.14□□□□□ -0.15
CAPN3P20807 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CAPN3P20807 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CAPN3P20807 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.14□□□□□ -0.15
CAPN3P20807 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CAPN3P20807 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CAPN3P20807 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CAPN3P20807 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.14□□□□□ -0.15
CAPN3P20807 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CAPN3P20807 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CAPN3P20807 BCYRN1-201ENST00000418539 200 ntBASIC14.14□□□□□ -0.15
CAPN3P20807 KRT43P-201ENST00000434019 910 ntBASIC14.14□□□□□ -0.15
CAPN3P20807 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.14□□□□□ -0.15
CAPN3P20807 RPL13AP25-201ENST00000484130 612 ntBASIC14.14□□□□□ -0.15
CAPN3P20807 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CAPN3P20807 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CAPN3P20807 AC104989.1-201ENST00000519711 778 ntBASIC14.14□□□□□ -0.15
CAPN3P20807 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.14□□□□□ -0.15
CAPN3P20807 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.14□□□□□ -0.15
CAPN3P20807 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.14□□□□□ -0.15
CAPN3P20807 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.14□□□□□ -0.15
CAPN3P20807 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.14□□□□□ -0.15
CAPN3P20807 AC004466.1-201ENST00000599515 1080 ntBASIC14.14□□□□□ -0.15
CAPN3P20807 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.14□□□□□ -0.15
CAPN3P20807 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
CAPN3P20807 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CAPN3P20807 AL157996.1-201ENST00000624684 2299 ntBASIC14.14□□□□□ -0.15
CAPN3P20807 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CAPN3P20807 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CAPN3P20807 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CAPN3P20807 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
CAPN3P20807 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CAPN3P20807 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
CAPN3P20807 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CAPN3P20807 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.14□□□□□ -0.15
CAPN3P20807 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CAPN3P20807 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CAPN3P20807 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CAPN3P20807 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CAPN3P20807 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.14□□□□□ -0.15
CAPN3P20807 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CAPN3P20807 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CAPN3P20807 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CAPN3P20807 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CAPN3P20807 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CAPN3P20807 KRT8P35-201ENST00000483942 1338 ntBASIC14.14□□□□□ -0.15
CAPN3P20807 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CAPN3P20807 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CAPN3P20807 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CAPN3P20807 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CAPN3P20807 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.14□□□□□ -0.15
CAPN3P20807 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms