Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAB3BP20337 IMP4-203ENST00000409935 958 ntTSL 5 BASIC12.89□□□□□ -0.35
RAB3BP20337 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC12.89□□□□□ -0.35
RAB3BP20337 TPM4P1-201ENST00000436100 807 ntBASIC12.89□□□□□ -0.35
RAB3BP20337 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB3BP20337 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAB3BP20337 HLA-V-204ENST00000476601 1289 ntBASIC12.89□□□□□ -0.35
RAB3BP20337 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
RAB3BP20337 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.89□□□□□ -0.35
RAB3BP20337 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.89□□□□□ -0.35
RAB3BP20337 AC107373.2-201ENST00000607735 490 ntBASIC12.89□□□□□ -0.35
RAB3BP20337 TEX28P1-201ENST00000613479 1221 ntBASIC12.89□□□□□ -0.35
RAB3BP20337 TEX28P2-201ENST00000617764 1221 ntBASIC12.89□□□□□ -0.35
RAB3BP20337 AP001059.3-201ENST00000619053 235 ntBASIC12.89□□□□□ -0.35
RAB3BP20337 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.89□□□□□ -0.35
RAB3BP20337 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB3BP20337 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.89□□□□□ -0.35
RAB3BP20337 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB3BP20337 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.89□□□□□ -0.35
RAB3BP20337 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB3BP20337 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAB3BP20337 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB3BP20337 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.89□□□□□ -0.35
RAB3BP20337 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB3BP20337 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB3BP20337 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB3BP20337 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
RAB3BP20337 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB3BP20337 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.89□□□□□ -0.35
RAB3BP20337 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.89□□□□□ -0.35
RAB3BP20337 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB3BP20337 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
RAB3BP20337 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.89□□□□□ -0.35
RAB3BP20337 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.89□□□□□ -0.35
RAB3BP20337 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
RAB3BP20337 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB3BP20337 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAB3BP20337 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB3BP20337 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB3BP20337 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.89□□□□□ -0.35
RAB3BP20337 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB3BP20337 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.89□□□□□ -0.35
RAB3BP20337 TUBB8P4-201ENST00000511806 1324 ntBASIC12.88□□□□□ -0.35
RAB3BP20337 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.88□□□□□ -0.35
RAB3BP20337 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
RAB3BP20337 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB3BP20337 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB3BP20337 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB3BP20337 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RAB3BP20337 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB3BP20337 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB3BP20337 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB3BP20337 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB3BP20337 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
RAB3BP20337 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RAB3BP20337 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB3BP20337 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.88□□□□□ -0.35
RAB3BP20337 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC12.88□□□□□ -0.35
RAB3BP20337 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC12.88□□□□□ -0.35
RAB3BP20337 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.88□□□□□ -0.35
RAB3BP20337 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.88□□□□□ -0.35
RAB3BP20337 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.88□□□□□ -0.35
RAB3BP20337 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.88□□□□□ -0.35
RAB3BP20337 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC12.88□□□□□ -0.35
RAB3BP20337 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
RAB3BP20337 AL158212.4-201ENST00000624062 1286 ntBASIC12.88□□□□□ -0.35
RAB3BP20337 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.88□□□□□ -0.35
RAB3BP20337 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB3BP20337 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
RAB3BP20337 NCLP1-201ENST00000445357 1963 ntBASIC12.88□□□□□ -0.35
RAB3BP20337 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB3BP20337 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.88□□□□□ -0.35
RAB3BP20337 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.88□□□□□ -0.35
RAB3BP20337 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB3BP20337 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RAB3BP20337 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB3BP20337 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB3BP20337 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.88□□□□□ -0.35
RAB3BP20337 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB3BP20337 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB3BP20337 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB3BP20337 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
RAB3BP20337 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB3BP20337 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.88□□□□□ -0.35
RAB3BP20337 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
RAB3BP20337 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB3BP20337 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.88□□□□□ -0.35
RAB3BP20337 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB3BP20337 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.88□□□□□ -0.35
RAB3BP20337 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.87□□□□□ -0.35
RAB3BP20337 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB3BP20337 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
RAB3BP20337 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB3BP20337 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.87□□□□□ -0.35
RAB3BP20337 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
RAB3BP20337 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.87□□□□□ -0.35
RAB3BP20337 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.87□□□□□ -0.35
RAB3BP20337 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB3BP20337 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RAB3BP20337 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms