Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
RARAP10276 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RARAP10276 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.38■□□□□ 0.05
RARAP10276 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.38■□□□□ 0.05
RARAP10276 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RARAP10276 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RARAP10276 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RARAP10276 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RARAP10276 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
RARAP10276 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
RARAP10276 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RARAP10276 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RARAP10276 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RARAP10276 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC15.38■□□□□ 0.05
RARAP10276 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC15.38■□□□□ 0.05
RARAP10276 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RARAP10276 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RARAP10276 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RARAP10276 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RARAP10276 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RARAP10276 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.37■□□□□ 0.05
RARAP10276 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RARAP10276 AL590440.2-201ENST00000641973 1595 ntBASIC15.37■□□□□ 0.05
RARAP10276 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RARAP10276 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.37■□□□□ 0.05
RARAP10276 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC15.37■□□□□ 0.05
RARAP10276 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.37■□□□□ 0.05
RARAP10276 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RARAP10276 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RARAP10276 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RARAP10276 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.37■□□□□ 0.05
RARAP10276 PUDPP3-201ENST00000445368 636 ntBASIC15.37■□□□□ 0.05
RARAP10276 COX20P2-201ENST00000452636 358 ntBASIC15.37■□□□□ 0.05
RARAP10276 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.37■□□□□ 0.05
RARAP10276 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RARAP10276 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RARAP10276 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.37■□□□□ 0.05
RARAP10276 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RARAP10276 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.37■□□□□ 0.05
RARAP10276 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.37■□□□□ 0.05
RARAP10276 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.37■□□□□ 0.05
RARAP10276 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.37■□□□□ 0.05
RARAP10276 AC138951.2-201ENST00000623455 1161 ntBASIC15.37■□□□□ 0.05
RARAP10276 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.37■□□□□ 0.05
RARAP10276 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.37■□□□□ 0.05
RARAP10276 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RARAP10276 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.37■□□□□ 0.05
RARAP10276 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RARAP10276 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.37■□□□□ 0.05
RARAP10276 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
RARAP10276 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RARAP10276 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RARAP10276 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RARAP10276 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RARAP10276 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RARAP10276 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RARAP10276 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.37■□□□□ 0.05
RARAP10276 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RARAP10276 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC15.37■□□□□ 0.05
RARAP10276 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
RARAP10276 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RARAP10276 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RARAP10276 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RARAP10276 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC15.37■□□□□ 0.05
RARAP10276 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.37■□□□□ 0.05
RARAP10276 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RARAP10276 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
RARAP10276 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.36■□□□□ 0.05
RARAP10276 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.36■□□□□ 0.05
RARAP10276 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
RARAP10276 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RARAP10276 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.36■□□□□ 0.05
RARAP10276 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
RARAP10276 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.36■□□□□ 0.05
RARAP10276 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RARAP10276 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
RARAP10276 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RARAP10276 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RARAP10276 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.36■□□□□ 0.05
RARAP10276 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RARAP10276 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RARAP10276 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RARAP10276 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RARAP10276 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
RARAP10276 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RARAP10276 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.36■□□□□ 0.05
RARAP10276 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.36■□□□□ 0.05
RARAP10276 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
RARAP10276 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.36■□□□□ 0.05
RARAP10276 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.36■□□□□ 0.05
RARAP10276 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RARAP10276 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.36■□□□□ 0.05
RARAP10276 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.36■□□□□ 0.05
RARAP10276 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
RARAP10276 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RARAP10276 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
RARAP10276 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.36■□□□□ 0.05
RARAP10276 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
RARAP10276 MIR4683-201ENST00000579659 81 ntBASIC15.36■□□□□ 0.05
RARAP10276 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms