Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LMNAP02545 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
LMNAP02545 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
LMNAP02545 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
LMNAP02545 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LMNAP02545 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LMNAP02545 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.41■□□□□ 0.06
LMNAP02545 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LMNAP02545 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LMNAP02545 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
LMNAP02545 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LMNAP02545 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
LMNAP02545 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.4■□□□□ 0.06
LMNAP02545 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LMNAP02545 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LMNAP02545 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LMNAP02545 AC027601.5-201ENST00000624065 2482 ntBASIC15.4■□□□□ 0.06
LMNAP02545 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LMNAP02545 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LMNAP02545 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.4■□□□□ 0.06
LMNAP02545 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LMNAP02545 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.4■□□□□ 0.06
LMNAP02545 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LMNAP02545 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LMNAP02545 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LMNAP02545 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LMNAP02545 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LMNAP02545 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LMNAP02545 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LMNAP02545 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.4■□□□□ 0.06
LMNAP02545 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LMNAP02545 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.4■□□□□ 0.06
LMNAP02545 SERF2-206ENST00000409291 807 ntTSL 3 BASIC15.4■□□□□ 0.06
LMNAP02545 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC15.4■□□□□ 0.06
LMNAP02545 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.4■□□□□ 0.06
LMNAP02545 RN7SL181P-201ENST00000462921 277 ntBASIC15.4■□□□□ 0.06
LMNAP02545 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
LMNAP02545 AC125604.1-201ENST00000496255 707 ntBASIC15.4■□□□□ 0.06
LMNAP02545 PTK2-225ENST00000520892 571 ntTSL 4 BASIC15.4■□□□□ 0.06
LMNAP02545 CFL1-206ENST00000527344 962 ntTSL 2 BASIC15.4■□□□□ 0.06
LMNAP02545 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.4■□□□□ 0.06
LMNAP02545 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.4■□□□□ 0.06
LMNAP02545 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LMNAP02545 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LMNAP02545 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.4■□□□□ 0.06
LMNAP02545 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC15.4■□□□□ 0.06
LMNAP02545 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.4■□□□□ 0.06
LMNAP02545 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LMNAP02545 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LMNAP02545 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.4■□□□□ 0.06
LMNAP02545 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LMNAP02545 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
LMNAP02545 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.4■□□□□ 0.06
LMNAP02545 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
LMNAP02545 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LMNAP02545 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LMNAP02545 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LMNAP02545 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.4■□□□□ 0.06
LMNAP02545 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LMNAP02545 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.4■□□□□ 0.06
LMNAP02545 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
LMNAP02545 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LMNAP02545 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
LMNAP02545 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
LMNAP02545 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LMNAP02545 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
LMNAP02545 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.39■□□□□ 0.05
LMNAP02545 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.39■□□□□ 0.05
LMNAP02545 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LMNAP02545 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.39■□□□□ 0.05
LMNAP02545 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
LMNAP02545 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LMNAP02545 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.39■□□□□ 0.05
LMNAP02545 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LMNAP02545 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.39■□□□□ 0.05
LMNAP02545 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
LMNAP02545 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.39■□□□□ 0.05
LMNAP02545 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LMNAP02545 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LMNAP02545 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LMNAP02545 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LMNAP02545 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LMNAP02545 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LMNAP02545 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.39■□□□□ 0.05
LMNAP02545 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC15.39■□□□□ 0.05
LMNAP02545 FGFR3P1-201ENST00000449999 601 ntBASIC15.39■□□□□ 0.05
LMNAP02545 AC019193.1-201ENST00000506678 823 ntBASIC15.39■□□□□ 0.05
LMNAP02545 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
LMNAP02545 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
LMNAP02545 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
LMNAP02545 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.39■□□□□ 0.05
LMNAP02545 AC005357.2-202ENST00000590507 1060 ntBASIC15.39■□□□□ 0.05
LMNAP02545 AC025181.2-201ENST00000606994 802 ntBASIC15.39■□□□□ 0.05
LMNAP02545 AP001065.2-201ENST00000617205 644 ntBASIC15.39■□□□□ 0.05
LMNAP02545 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LMNAP02545 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
LMNAP02545 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LMNAP02545 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.39■□□□□ 0.05
LMNAP02545 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC15.39■□□□□ 0.05
LMNAP02545 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms