Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC17.37■□□□□ 0.37
MBD4O95243 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD4O95243 AC064801.2-201ENST00000625052 1303 ntBASIC17.37■□□□□ 0.37
MBD4O95243 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC17.37■□□□□ 0.37
MBD4O95243 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MBD4O95243 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC17.37■□□□□ 0.37
MBD4O95243 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC17.37■□□□□ 0.37
MBD4O95243 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD4O95243 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.37■□□□□ 0.37
MBD4O95243 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
MBD4O95243 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
MBD4O95243 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
MBD4O95243 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MBD4O95243 LINC01165-201ENST00000445190 1623 ntBASIC17.36■□□□□ 0.37
MBD4O95243 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
MBD4O95243 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC17.36■□□□□ 0.37
MBD4O95243 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC17.36■□□□□ 0.37
MBD4O95243 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MBD4O95243 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MBD4O95243 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MBD4O95243 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
MBD4O95243 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC17.36■□□□□ 0.37
MBD4O95243 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MBD4O95243 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
MBD4O95243 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
MBD4O95243 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
MBD4O95243 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.36■□□□□ 0.37
MBD4O95243 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC17.36■□□□□ 0.37
MBD4O95243 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.36■□□□□ 0.37
MBD4O95243 NUP210P1-202ENST00000504322 710 ntBASIC17.36■□□□□ 0.37
MBD4O95243 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.36■□□□□ 0.37
MBD4O95243 AC097724.1-201ENST00000609581 426 ntBASIC17.36■□□□□ 0.37
MBD4O95243 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MBD4O95243 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC17.36■□□□□ 0.37
MBD4O95243 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
MBD4O95243 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MBD4O95243 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
MBD4O95243 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MBD4O95243 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MBD4O95243 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MBD4O95243 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
MBD4O95243 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MBD4O95243 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC17.36■□□□□ 0.37
MBD4O95243 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MBD4O95243 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC17.35■□□□□ 0.37
MBD4O95243 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MBD4O95243 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MBD4O95243 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC17.35■□□□□ 0.37
MBD4O95243 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MBD4O95243 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.35■□□□□ 0.37
MBD4O95243 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MBD4O95243 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MBD4O95243 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MBD4O95243 AC012617.1-204ENST00000586340 2305 ntBASIC17.35■□□□□ 0.37
MBD4O95243 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MBD4O95243 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
MBD4O95243 AC239868.1-201ENST00000369385 493 ntBASIC17.35■□□□□ 0.37
MBD4O95243 AL662890.1-201ENST00000396818 632 ntBASIC17.35■□□□□ 0.37
MBD4O95243 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MBD4O95243 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC17.35■□□□□ 0.37
MBD4O95243 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.35■□□□□ 0.37
MBD4O95243 AC073150.1-201ENST00000450406 1084 ntBASIC17.35■□□□□ 0.37
MBD4O95243 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC17.35■□□□□ 0.37
MBD4O95243 AL161670.2-201ENST00000557650 1227 ntBASIC17.35■□□□□ 0.37
MBD4O95243 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
MBD4O95243 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.35■□□□□ 0.37
MBD4O95243 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC17.35■□□□□ 0.37
MBD4O95243 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC17.35■□□□□ 0.37
MBD4O95243 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC17.35■□□□□ 0.37
MBD4O95243 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC17.35■□□□□ 0.37
MBD4O95243 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC17.35■□□□□ 0.37
MBD4O95243 MEG3_2.1-201ENST00000611456 105 ntBASIC17.35■□□□□ 0.37
MBD4O95243 AF254983.2-201ENST00000612331 135 ntBASIC17.35■□□□□ 0.37
MBD4O95243 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
MBD4O95243 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MBD4O95243 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
MBD4O95243 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.35■□□□□ 0.37
MBD4O95243 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MBD4O95243 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MBD4O95243 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC17.35■□□□□ 0.37
MBD4O95243 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
MBD4O95243 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC17.35■□□□□ 0.37
MBD4O95243 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
MBD4O95243 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
MBD4O95243 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
MBD4O95243 AC090505.1-201ENST00000430515 1834 ntBASIC17.35■□□□□ 0.37
MBD4O95243 STK26-204ENST00000481105 1835 ntTSL 2 BASIC17.35■□□□□ 0.37
MBD4O95243 ADK-205ENST00000539909 1866 ntTSL 2 BASIC17.35■□□□□ 0.37
MBD4O95243 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MBD4O95243 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC17.35■□□□□ 0.37
MBD4O95243 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC17.35■□□□□ 0.37
MBD4O95243 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MBD4O95243 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
MBD4O95243 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MBD4O95243 WARS-203ENST00000358655 2466 ntTSL 2 BASIC17.35■□□□□ 0.37
MBD4O95243 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.34■□□□□ 0.37
MBD4O95243 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MBD4O95243 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MBD4O95243 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MBD4O95243 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms