Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM4O75871 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM4O75871 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CEACAM4O75871 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM4O75871 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM4O75871 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM4O75871 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM4O75871 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM4O75871 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC13.09□□□□□ -0.31
CEACAM4O75871 ACTG1P19-201ENST00000418987 1116 ntBASIC13.09□□□□□ -0.31
CEACAM4O75871 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC13.09□□□□□ -0.31
CEACAM4O75871 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC13.09□□□□□ -0.31
CEACAM4O75871 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM4O75871 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC13.09□□□□□ -0.31
CEACAM4O75871 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC13.09□□□□□ -0.31
CEACAM4O75871 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM4O75871 PPOX-204ENST00000462866 473 ntTSL 5 BASIC13.09□□□□□ -0.31
CEACAM4O75871 PPIA-208ENST00000489459 907 ntTSL 2 BASIC13.09□□□□□ -0.31
CEACAM4O75871 RN7SL564P-201ENST00000496309 250 ntBASIC13.09□□□□□ -0.31
CEACAM4O75871 AC093909.3-201ENST00000504783 336 ntBASIC13.09□□□□□ -0.31
CEACAM4O75871 AC093826.1-201ENST00000508655 993 ntBASIC13.09□□□□□ -0.31
CEACAM4O75871 RNA5SP406-201ENST00000516106 112 ntBASIC13.09□□□□□ -0.31
CEACAM4O75871 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM4O75871 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM4O75871 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM4O75871 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM4O75871 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CEACAM4O75871 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC13.09□□□□□ -0.31
CEACAM4O75871 SNORD3B-1-201ENST00000577988 758 ntBASIC13.09□□□□□ -0.31
CEACAM4O75871 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC13.09□□□□□ -0.31
CEACAM4O75871 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.09□□□□□ -0.31
CEACAM4O75871 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC13.09□□□□□ -0.31
CEACAM4O75871 AC011247.3-201ENST00000603297 438 ntBASIC13.09□□□□□ -0.31
CEACAM4O75871 PPIA-210ENST00000620047 827 ntTSL 5 BASIC13.09□□□□□ -0.31
CEACAM4O75871 AC022532.1-201ENST00000624563 1728 ntBASIC13.09□□□□□ -0.31
CEACAM4O75871 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CEACAM4O75871 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM4O75871 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM4O75871 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM4O75871 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
CEACAM4O75871 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.09□□□□□ -0.31
CEACAM4O75871 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.09□□□□□ -0.31
CEACAM4O75871 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM4O75871 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM4O75871 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.09□□□□□ -0.31
CEACAM4O75871 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM4O75871 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM4O75871 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM4O75871 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM4O75871 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CEACAM4O75871 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CEACAM4O75871 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
CEACAM4O75871 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CEACAM4O75871 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CEACAM4O75871 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.08□□□□□ -0.31
CEACAM4O75871 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CEACAM4O75871 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.31
CEACAM4O75871 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CEACAM4O75871 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
CEACAM4O75871 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM4O75871 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CEACAM4O75871 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
CEACAM4O75871 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM4O75871 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM4O75871 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.08□□□□□ -0.32
CEACAM4O75871 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.08□□□□□ -0.32
CEACAM4O75871 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.08□□□□□ -0.32
CEACAM4O75871 AGAP7P-201ENST00000582299 2062 ntBASIC13.08□□□□□ -0.32
CEACAM4O75871 AGAP14-201ENST00000624701 2060 ntBASIC13.08□□□□□ -0.32
CEACAM4O75871 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.08□□□□□ -0.32
CEACAM4O75871 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM4O75871 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CEACAM4O75871 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.08□□□□□ -0.32
CEACAM4O75871 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM4O75871 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CEACAM4O75871 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CEACAM4O75871 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM4O75871 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC13.08□□□□□ -0.32
CEACAM4O75871 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC13.08□□□□□ -0.32
CEACAM4O75871 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM4O75871 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM4O75871 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC13.08□□□□□ -0.32
CEACAM4O75871 IGHV1-12-201ENST00000518307 205 ntBASIC13.08□□□□□ -0.32
CEACAM4O75871 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM4O75871 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC13.08□□□□□ -0.32
CEACAM4O75871 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM4O75871 AC145285.5-201ENST00000562217 361 ntBASIC13.08□□□□□ -0.32
CEACAM4O75871 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM4O75871 MIR6074-201ENST00000612054 107 ntBASIC13.08□□□□□ -0.32
CEACAM4O75871 ST5-261ENST00000626808 1071 ntTSL 5 BASIC13.08□□□□□ -0.32
CEACAM4O75871 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
CEACAM4O75871 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM4O75871 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM4O75871 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM4O75871 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM4O75871 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.08□□□□□ -0.32
CEACAM4O75871 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM4O75871 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM4O75871 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CEACAM4O75871 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms