Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK1BO75841 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK1BO75841 HLA-H-201ENST00000383620 1096 ntBASIC12.73□□□□□ -0.37
UPK1BO75841 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC12.73□□□□□ -0.37
UPK1BO75841 IGLL3P-201ENST00000412472 434 ntBASIC12.73□□□□□ -0.37
UPK1BO75841 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC12.73□□□□□ -0.37
UPK1BO75841 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12.73□□□□□ -0.37
UPK1BO75841 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
UPK1BO75841 AC004066.1-201ENST00000502488 802 ntBASIC12.73□□□□□ -0.37
UPK1BO75841 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC12.73□□□□□ -0.37
UPK1BO75841 RPS29-206ENST00000557111 488 ntTSL 2 BASIC12.73□□□□□ -0.37
UPK1BO75841 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC12.73□□□□□ -0.37
UPK1BO75841 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK1BO75841 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK1BO75841 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK1BO75841 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK1BO75841 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK1BO75841 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK1BO75841 AC002350.2-201ENST00000623894 1828 ntBASIC12.73□□□□□ -0.37
UPK1BO75841 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
UPK1BO75841 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK1BO75841 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UPK1BO75841 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.73□□□□□ -0.37
UPK1BO75841 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
UPK1BO75841 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
UPK1BO75841 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC12.73□□□□□ -0.37
UPK1BO75841 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK1BO75841 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.73□□□□□ -0.37
UPK1BO75841 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.73□□□□□ -0.37
UPK1BO75841 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.73□□□□□ -0.37
UPK1BO75841 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK1BO75841 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK1BO75841 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK1BO75841 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK1BO75841 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UPK1BO75841 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK1BO75841 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UPK1BO75841 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UPK1BO75841 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK1BO75841 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.72□□□□□ -0.37
UPK1BO75841 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK1BO75841 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK1BO75841 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UPK1BO75841 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
UPK1BO75841 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UPK1BO75841 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK1BO75841 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UPK1BO75841 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC12.72□□□□□ -0.37
UPK1BO75841 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC12.72□□□□□ -0.37
UPK1BO75841 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK1BO75841 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC12.72□□□□□ -0.37
UPK1BO75841 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK1BO75841 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UPK1BO75841 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.72□□□□□ -0.37
UPK1BO75841 AL136172.1-201ENST00000598590 1394 ntBASIC12.72□□□□□ -0.37
UPK1BO75841 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
UPK1BO75841 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
UPK1BO75841 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
UPK1BO75841 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK1BO75841 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK1BO75841 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UPK1BO75841 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UPK1BO75841 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK1BO75841 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK1BO75841 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC12.72□□□□□ -0.37
UPK1BO75841 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK1BO75841 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK1BO75841 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UPK1BO75841 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UPK1BO75841 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
UPK1BO75841 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
UPK1BO75841 AC074338.1-201ENST00000416825 156 ntBASIC12.72□□□□□ -0.37
UPK1BO75841 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UPK1BO75841 HLA-K-203ENST00000430151 1046 ntBASIC12.72□□□□□ -0.37
UPK1BO75841 RPS2P1-201ENST00000434010 821 ntBASIC12.72□□□□□ -0.37
UPK1BO75841 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
UPK1BO75841 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC12.72□□□□□ -0.37
UPK1BO75841 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK1BO75841 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC12.72□□□□□ -0.37
UPK1BO75841 AC008735.5-201ENST00000623544 497 ntBASIC12.72□□□□□ -0.37
UPK1BO75841 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK1BO75841 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK1BO75841 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
UPK1BO75841 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UPK1BO75841 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UPK1BO75841 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC12.72□□□□□ -0.37
UPK1BO75841 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK1BO75841 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK1BO75841 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK1BO75841 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
UPK1BO75841 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK1BO75841 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UPK1BO75841 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK1BO75841 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK1BO75841 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC12.72□□□□□ -0.37
UPK1BO75841 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UPK1BO75841 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UPK1BO75841 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
UPK1BO75841 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UPK1BO75841 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms