Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
HCN1O60741 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HCN1O60741 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HCN1O60741 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HCN1O60741 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.78□□□□□ -0.2
HCN1O60741 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
HCN1O60741 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.78□□□□□ -0.2
HCN1O60741 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.78□□□□□ -0.2
HCN1O60741 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.78□□□□□ -0.2
HCN1O60741 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.78□□□□□ -0.2
HCN1O60741 AC022616.1-201ENST00000518688 554 ntBASIC13.78□□□□□ -0.2
HCN1O60741 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.78□□□□□ -0.2
HCN1O60741 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.78□□□□□ -0.2
HCN1O60741 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.78□□□□□ -0.2
HCN1O60741 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.78□□□□□ -0.2
HCN1O60741 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.78□□□□□ -0.2
HCN1O60741 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HCN1O60741 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HCN1O60741 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
HCN1O60741 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HCN1O60741 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
HCN1O60741 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HCN1O60741 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
HCN1O60741 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
HCN1O60741 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.78□□□□□ -0.2
HCN1O60741 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HCN1O60741 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HCN1O60741 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HCN1O60741 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HCN1O60741 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
HCN1O60741 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HCN1O60741 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.78□□□□□ -0.2
HCN1O60741 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
HCN1O60741 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HCN1O60741 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
HCN1O60741 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HCN1O60741 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
HCN1O60741 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
HCN1O60741 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
HCN1O60741 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.77□□□□□ -0.2
HCN1O60741 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.2
HCN1O60741 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HCN1O60741 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HCN1O60741 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HCN1O60741 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HCN1O60741 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HCN1O60741 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
HCN1O60741 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HCN1O60741 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HCN1O60741 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HCN1O60741 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.77□□□□□ -0.21
HCN1O60741 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
HCN1O60741 FAM86MP-201ENST00000340703 885 ntBASIC13.77□□□□□ -0.21
HCN1O60741 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HCN1O60741 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HCN1O60741 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
HCN1O60741 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HCN1O60741 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HCN1O60741 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
HCN1O60741 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HCN1O60741 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.77□□□□□ -0.21
HCN1O60741 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.77□□□□□ -0.21
HCN1O60741 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.77□□□□□ -0.21
HCN1O60741 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.77□□□□□ -0.21
HCN1O60741 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.77□□□□□ -0.21
HCN1O60741 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HCN1O60741 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.77□□□□□ -0.21
HCN1O60741 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
HCN1O60741 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.77□□□□□ -0.21
HCN1O60741 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.77□□□□□ -0.21
HCN1O60741 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
HCN1O60741 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HCN1O60741 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
HCN1O60741 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HCN1O60741 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
HCN1O60741 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.77□□□□□ -0.21
HCN1O60741 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HCN1O60741 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.77□□□□□ -0.21
HCN1O60741 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
HCN1O60741 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.77□□□□□ -0.21
HCN1O60741 RN7SL219P-201ENST00000582872 296 ntBASIC13.77□□□□□ -0.21
HCN1O60741 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.77□□□□□ -0.21
HCN1O60741 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.77□□□□□ -0.21
HCN1O60741 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.77□□□□□ -0.21
HCN1O60741 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HCN1O60741 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
HCN1O60741 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.77□□□□□ -0.21
HCN1O60741 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.77□□□□□ -0.21
HCN1O60741 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HCN1O60741 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HCN1O60741 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HCN1O60741 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
HCN1O60741 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.77□□□□□ -0.21
HCN1O60741 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
HCN1O60741 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
HCN1O60741 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HCN1O60741 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HCN1O60741 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HCN1O60741 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HCN1O60741 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms