Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC7O00311 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC7O00311 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CDC7O00311 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC7O00311 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CDC7O00311 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
CDC7O00311 AL035633.1-201ENST00000406139 838 ntBASIC14.38□□□□□ -0.11
CDC7O00311 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.38□□□□□ -0.11
CDC7O00311 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDC7O00311 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.38□□□□□ -0.11
CDC7O00311 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC7O00311 COX20P2-201ENST00000452636 358 ntBASIC14.38□□□□□ -0.11
CDC7O00311 CROCCP4-201ENST00000457096 498 ntBASIC14.38□□□□□ -0.11
CDC7O00311 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.38□□□□□ -0.11
CDC7O00311 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.38□□□□□ -0.11
CDC7O00311 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.38□□□□□ -0.11
CDC7O00311 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.38□□□□□ -0.11
CDC7O00311 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.38□□□□□ -0.11
CDC7O00311 AC105233.6-201ENST00000642093 218 ntBASIC14.38□□□□□ -0.11
CDC7O00311 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC7O00311 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
CDC7O00311 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC7O00311 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC7O00311 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC7O00311 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC7O00311 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC7O00311 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC7O00311 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDC7O00311 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC7O00311 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CDC7O00311 KRT8P24-201ENST00000560290 1559 ntBASIC14.38□□□□□ -0.11
CDC7O00311 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.38□□□□□ -0.11
CDC7O00311 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC7O00311 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC7O00311 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.38□□□□□ -0.11
CDC7O00311 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC7O00311 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.38□□□□□ -0.11
CDC7O00311 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC7O00311 AC104581.4-201ENST00000623126 3052 ntBASIC14.38□□□□□ -0.11
CDC7O00311 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.38□□□□□ -0.11
CDC7O00311 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC7O00311 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC7O00311 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.37□□□□□ -0.11
CDC7O00311 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC7O00311 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDC7O00311 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CDC7O00311 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.37□□□□□ -0.11
CDC7O00311 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC7O00311 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC7O00311 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CDC7O00311 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC7O00311 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC7O00311 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC7O00311 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC7O00311 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CDC7O00311 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CDC7O00311 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
CDC7O00311 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC7O00311 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CDC7O00311 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDC7O00311 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CDC7O00311 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CDC7O00311 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CDC7O00311 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.37□□□□□ -0.11
CDC7O00311 ARSEP1-201ENST00000420443 635 ntBASIC14.37□□□□□ -0.11
CDC7O00311 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.37□□□□□ -0.11
CDC7O00311 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CDC7O00311 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.37□□□□□ -0.11
CDC7O00311 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDC7O00311 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDC7O00311 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.37□□□□□ -0.11
CDC7O00311 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDC7O00311 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.37□□□□□ -0.11
CDC7O00311 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CDC7O00311 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CDC7O00311 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.37□□□□□ -0.11
CDC7O00311 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.37□□□□□ -0.11
CDC7O00311 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.37□□□□□ -0.11
CDC7O00311 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDC7O00311 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC7O00311 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.37□□□□□ -0.11
CDC7O00311 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC7O00311 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.37□□□□□ -0.11
CDC7O00311 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CDC7O00311 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CDC7O00311 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDC7O00311 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC7O00311 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC7O00311 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC7O00311 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDC7O00311 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC7O00311 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC7O00311 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC7O00311 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.36□□□□□ -0.11
CDC7O00311 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.36□□□□□ -0.11
CDC7O00311 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC7O00311 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC7O00311 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC7O00311 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC7O00311 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms