Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM1O00151 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
PDLIM1O00151 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM1O00151 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.04□□□□□ -0.16
PDLIM1O00151 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM1O00151 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM1O00151 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM1O00151 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
PDLIM1O00151 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
PDLIM1O00151 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.04□□□□□ -0.16
PDLIM1O00151 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM1O00151 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.04□□□□□ -0.16
PDLIM1O00151 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.04□□□□□ -0.16
PDLIM1O00151 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PDLIM1O00151 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.04□□□□□ -0.16
PDLIM1O00151 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.04□□□□□ -0.16
PDLIM1O00151 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.04□□□□□ -0.16
PDLIM1O00151 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM1O00151 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM1O00151 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.04□□□□□ -0.16
PDLIM1O00151 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.04□□□□□ -0.16
PDLIM1O00151 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM1O00151 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM1O00151 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM1O00151 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM1O00151 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.04□□□□□ -0.16
PDLIM1O00151 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PDLIM1O00151 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM1O00151 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM1O00151 BTBD7P1-201ENST00000447253 1453 ntBASIC14.04□□□□□ -0.16
PDLIM1O00151 AC020910.6-201ENST00000623084 1459 ntBASIC14.04□□□□□ -0.16
PDLIM1O00151 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.04□□□□□ -0.16
PDLIM1O00151 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
PDLIM1O00151 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM1O00151 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.04□□□□□ -0.16
PDLIM1O00151 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC14.04□□□□□ -0.16
PDLIM1O00151 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM1O00151 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
PDLIM1O00151 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM1O00151 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PDLIM1O00151 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM1O00151 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM1O00151 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PDLIM1O00151 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM1O00151 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM1O00151 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM1O00151 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM1O00151 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PDLIM1O00151 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
PDLIM1O00151 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
PDLIM1O00151 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM1O00151 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM1O00151 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM1O00151 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC14.03□□□□□ -0.16
PDLIM1O00151 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.03□□□□□ -0.16
PDLIM1O00151 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM1O00151 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM1O00151 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC14.03□□□□□ -0.16
PDLIM1O00151 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.03□□□□□ -0.16
PDLIM1O00151 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM1O00151 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM1O00151 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM1O00151 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.03□□□□□ -0.16
PDLIM1O00151 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.03□□□□□ -0.16
PDLIM1O00151 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.03□□□□□ -0.16
PDLIM1O00151 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM1O00151 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.03□□□□□ -0.16
PDLIM1O00151 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.03□□□□□ -0.16
PDLIM1O00151 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.03□□□□□ -0.16
PDLIM1O00151 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.03□□□□□ -0.16
PDLIM1O00151 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
PDLIM1O00151 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.03□□□□□ -0.16
PDLIM1O00151 AC025048.3-201ENST00000590609 569 ntBASIC14.03□□□□□ -0.16
PDLIM1O00151 AC008738.7-201ENST00000609744 511 ntBASIC14.03□□□□□ -0.16
PDLIM1O00151 AC005702.4-201ENST00000618393 416 ntBASIC14.03□□□□□ -0.16
PDLIM1O00151 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.03□□□□□ -0.16
PDLIM1O00151 AL360270.3-201ENST00000609118 1348 ntBASIC14.03□□□□□ -0.16
PDLIM1O00151 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PDLIM1O00151 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM1O00151 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PDLIM1O00151 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.03□□□□□ -0.16
PDLIM1O00151 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM1O00151 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM1O00151 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM1O00151 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.03□□□□□ -0.16
PDLIM1O00151 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
PDLIM1O00151 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
PDLIM1O00151 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.03□□□□□ -0.16
PDLIM1O00151 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PDLIM1O00151 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM1O00151 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
PDLIM1O00151 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM1O00151 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
PDLIM1O00151 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.03□□□□□ -0.16
PDLIM1O00151 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC14.03□□□□□ -0.16
PDLIM1O00151 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM1O00151 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.03□□□□□ -0.16
PDLIM1O00151 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM1O00151 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PDLIM1O00151 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms