Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
TBC1D3FA6NER0 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 AJ011931.1-201ENST00000618749 2492 ntBASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 KRT18P36-201ENST00000411618 1276 ntBASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 MPRIPP1-201ENST00000452433 1089 ntBASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 PGAM1P5-201ENST00000548011 764 ntBASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 AC006480.2-201ENST00000609770 1337 ntBASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TBC1D3FA6NER0 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TBC1D3FA6NER0 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TBC1D3FA6NER0 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TBC1D3FA6NER0 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TBC1D3FA6NER0 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TBC1D3FA6NER0 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.53□□□□□ -0.08
TBC1D3FA6NER0 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TBC1D3FA6NER0 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
TBC1D3FA6NER0 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TBC1D3FA6NER0 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TBC1D3FA6NER0 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.53□□□□□ -0.08
TBC1D3FA6NER0 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
TBC1D3FA6NER0 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TBC1D3FA6NER0 LINC01165-201ENST00000445190 1623 ntBASIC14.53□□□□□ -0.08
TBC1D3FA6NER0 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TBC1D3FA6NER0 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TBC1D3FA6NER0 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TBC1D3FA6NER0 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.53□□□□□ -0.08
TBC1D3FA6NER0 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.53□□□□□ -0.08
TBC1D3FA6NER0 OR2K2-202ENST00000374428 1038 ntBASIC14.53□□□□□ -0.08
TBC1D3FA6NER0 MIR33B-201ENST00000385104 96 ntBASIC14.53□□□□□ -0.08
TBC1D3FA6NER0 MPV17-204ENST00000399052 749 ntTSL 4 BASIC14.53□□□□□ -0.08
TBC1D3FA6NER0 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TBC1D3FA6NER0 FXNP2-201ENST00000411625 547 ntBASIC14.53□□□□□ -0.08
TBC1D3FA6NER0 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TBC1D3FA6NER0 RPS2P36-201ENST00000456516 831 ntBASIC14.53□□□□□ -0.08
TBC1D3FA6NER0 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TBC1D3FA6NER0 RN7SL67P-201ENST00000492147 296 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms