Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 AC008735.3-201ENST00000596646 500 ntBASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 AC233724.13-201ENST00000598383 410 ntBASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 AL354718.3-201ENST00000616414 581 ntBASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 SRP9-204ENST00000619790 377 ntTSL 2 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 CR382287.1-201ENST00000623954 586 ntBASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 SALL4P5-201ENST00000419001 1760 ntBASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 API5-203ENST00000455725 2257 ntTSL 2 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 COL6A4P2-202ENST00000504443 2753 ntBASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 CES1P1-201ENST00000421606 1704 ntBASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
HLA-DRB4X5D2U9 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 AC152010.1-201ENST00000415779 2006 ntBASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 PEG13-201ENST00000631594 5667 ntBASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 AL035633.1-201ENST00000406139 838 ntBASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 NME2P1-201ENST00000426182 414 ntBASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 COX20P2-201ENST00000452636 358 ntBASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 SLC25A47P1-201ENST00000531577 414 ntBASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 AC025279.2-201ENST00000569730 653 ntBASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 AC105233.6-201ENST00000642093 218 ntBASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 AC003102.2-201ENST00000589195 1469 ntBASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
HLA-DRB4X5D2U9 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
HLA-DRB4X5D2U9 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms