Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 AGAP7P-201ENST00000582299 2062 ntBASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 AGAP14-201ENST00000624701 2060 ntBASIC14.34□□□□□ -0.11
CSNK1G3Q9Y6M4 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CSNK1G3Q9Y6M4 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CSNK1G3Q9Y6M4 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.33□□□□□ -0.11
CSNK1G3Q9Y6M4 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
CSNK1G3Q9Y6M4 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CSNK1G3Q9Y6M4 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.33□□□□□ -0.11
CSNK1G3Q9Y6M4 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 IGLV3-15-201ENST00000518356 244 ntBASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 SNX1-214ENST00000625244 324 ntTSL 5 BASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 CICP23-201ENST00000605013 2741 ntBASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1G3Q9Y6M4 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 AC009093.10-201ENST00000641956 1442 ntBASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 LINC01101-201ENST00000622953 1884 ntBASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 AC008723.1-201ENST00000506922 207 ntBASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 AC026803.1-201ENST00000569130 274 ntBASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 NAT9-224ENST00000583757 583 ntTSL 3 BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 MIR6769A-201ENST00000617340 73 ntBASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 FRMPD2B-201ENST00000431305 1347 ntBASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 OR2I1P-210ENST00000642037 4691 ntBASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 SNX18-202ENST00000343017 3140 ntBASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1G3Q9Y6M4 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms