Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
HDGFL3Q9Y3E1 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 AL157407.1-201ENST00000435784 904 ntBASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 RPS2P32-201ENST00000439199 892 ntBASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 TUBB8P8-201ENST00000458717 1058 ntBASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 RPSAP36-202ENST00000494591 1261 ntBASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 FAM86HP-204ENST00000513466 959 ntBASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 AC005586.2-201ENST00000563946 837 ntBASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 MIR6752-201ENST00000618442 71 ntBASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 AL162426.1-201ENST00000624141 743 ntBASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 AL365209.1-201ENST00000624418 6473 ntBASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HDGFL3Q9Y3E1 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HDGFL3Q9Y3E1 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
HDGFL3Q9Y3E1 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HDGFL3Q9Y3E1 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HDGFL3Q9Y3E1 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HDGFL3Q9Y3E1 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.16□□□□□ -0.3
HDGFL3Q9Y3E1 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
HDGFL3Q9Y3E1 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HDGFL3Q9Y3E1 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.16□□□□□ -0.3
HDGFL3Q9Y3E1 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
HDGFL3Q9Y3E1 AC244394.1-201ENST00000435000 1665 ntBASIC13.16□□□□□ -0.3
HDGFL3Q9Y3E1 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.16□□□□□ -0.3
HDGFL3Q9Y3E1 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
HDGFL3Q9Y3E1 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.16□□□□□ -0.3
HDGFL3Q9Y3E1 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HDGFL3Q9Y3E1 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HDGFL3Q9Y3E1 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HDGFL3Q9Y3E1 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HDGFL3Q9Y3E1 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.16□□□□□ -0.3
HDGFL3Q9Y3E1 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HDGFL3Q9Y3E1 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.16□□□□□ -0.3
HDGFL3Q9Y3E1 RPL13AP20-201ENST00000459725 609 ntBASIC13.16□□□□□ -0.3
HDGFL3Q9Y3E1 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.16□□□□□ -0.3
HDGFL3Q9Y3E1 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.16□□□□□ -0.3
HDGFL3Q9Y3E1 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.16□□□□□ -0.3
HDGFL3Q9Y3E1 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.16□□□□□ -0.3
HDGFL3Q9Y3E1 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.16□□□□□ -0.3
HDGFL3Q9Y3E1 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.16□□□□□ -0.3
HDGFL3Q9Y3E1 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.16□□□□□ -0.3
HDGFL3Q9Y3E1 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HDGFL3Q9Y3E1 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.16□□□□□ -0.3
HDGFL3Q9Y3E1 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms