Protein–RNA interactions for Protein: Q9Y3C4

TPRKB, EKC/KEOPS complex subunit TPRKB, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKBQ9Y3C4 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.42□□□□□ -0.26
TPRKBQ9Y3C4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TPRKBQ9Y3C4 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TPRKBQ9Y3C4 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TPRKBQ9Y3C4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TPRKBQ9Y3C4 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TPRKBQ9Y3C4 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.42□□□□□ -0.26
TPRKBQ9Y3C4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 POM121L14P-201ENST00000406100 1558 ntBASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 AC009474.1-201ENST00000455096 1565 ntBASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 REXO1L1P-201ENST00000379010 6598 ntBASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 AC007967.4-201ENST00000614700 386 ntBASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 AL033527.5-202ENST00000641632 1098 ntBASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TPRKBQ9Y3C4 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 MRPL37P1-201ENST00000592451 1337 ntBASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 SALL4P5-201ENST00000419001 1760 ntBASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC13.4□□□□□ -0.26
TPRKBQ9Y3C4 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.4□□□□□ -0.27
TPRKBQ9Y3C4 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms