Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 AP000845.1-201ENST00000581677 2131 ntBASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 AGAP7P-201ENST00000582299 2062 ntBASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 AGAP14-201ENST00000624701 2060 ntBASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 AL035633.1-201ENST00000406139 838 ntBASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 CD8B2-202ENST00000417670 633 ntBASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 AC245100.3-201ENST00000441281 285 ntBASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 RN7SL837P-201ENST00000463010 287 ntBASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 DUX4L47-201ENST00000566374 394 ntBASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 AC106886.1-201ENST00000568660 600 ntBASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 BTNL10-201ENST00000595971 695 ntBASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 LINC02084-201ENST00000606069 1096 ntBASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 GPI-205ENST00000586425 1799 ntTSL 5 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 AC055811.4-201ENST00000624039 1754 ntBASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 COCH-203ENST00000460581 2688 ntTSL 2 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC9.67□□□□□ -0.86
LINC00474Q9P2X8 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 FOS-202ENST00000535987 1402 ntTSL 2 BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 CICP16-201ENST00000502609 2813 ntBASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 LINC01101-201ENST00000622953 1884 ntBASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 AL137783.1-201ENST00000623494 1896 ntBASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LINC00474Q9P2X8 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms