Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.37■□□□□ 0.21
COL20A1Q9P218 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
COL20A1Q9P218 KRT8P1-201ENST00000557533 1207 ntBASIC16.37■□□□□ 0.21
COL20A1Q9P218 RN7SL555P-201ENST00000584742 339 ntBASIC16.37■□□□□ 0.21
COL20A1Q9P218 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC16.37■□□□□ 0.21
COL20A1Q9P218 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
COL20A1Q9P218 AC242376.2-201ENST00000619355 883 ntBASIC16.37■□□□□ 0.21
COL20A1Q9P218 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL20A1Q9P218 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL20A1Q9P218 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.37■□□□□ 0.21
COL20A1Q9P218 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL20A1Q9P218 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC16.37■□□□□ 0.21
COL20A1Q9P218 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL20A1Q9P218 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL20A1Q9P218 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
COL20A1Q9P218 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL20A1Q9P218 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL20A1Q9P218 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL20A1Q9P218 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL20A1Q9P218 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
COL20A1Q9P218 AC232323.1-201ENST00000540724 2099 ntBASIC16.36■□□□□ 0.21
COL20A1Q9P218 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COL20A1Q9P218 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COL20A1Q9P218 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
COL20A1Q9P218 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL20A1Q9P218 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL20A1Q9P218 INTS4P1-203ENST00000641008 3683 ntBASIC16.36■□□□□ 0.21
COL20A1Q9P218 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL20A1Q9P218 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COL20A1Q9P218 AC007686.3-201ENST00000619017 3487 ntBASIC16.36■□□□□ 0.21
COL20A1Q9P218 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL20A1Q9P218 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COL20A1Q9P218 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC16.36■□□□□ 0.21
COL20A1Q9P218 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC16.36■□□□□ 0.21
COL20A1Q9P218 RN7SL181P-201ENST00000462921 277 ntBASIC16.36■□□□□ 0.21
COL20A1Q9P218 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC16.36■□□□□ 0.21
COL20A1Q9P218 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC16.36■□□□□ 0.21
COL20A1Q9P218 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC16.36■□□□□ 0.21
COL20A1Q9P218 AC092171.5-201ENST00000608012 942 ntBASIC16.36■□□□□ 0.21
COL20A1Q9P218 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COL20A1Q9P218 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC16.36■□□□□ 0.21
COL20A1Q9P218 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL20A1Q9P218 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.36■□□□□ 0.21
COL20A1Q9P218 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL20A1Q9P218 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC16.36■□□□□ 0.21
COL20A1Q9P218 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.36■□□□□ 0.21
COL20A1Q9P218 LINC02228-204ENST00000642115 2962 ntBASIC16.36■□□□□ 0.21
COL20A1Q9P218 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COL20A1Q9P218 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COL20A1Q9P218 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
COL20A1Q9P218 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.36■□□□□ 0.21
COL20A1Q9P218 CCT8L1P-201ENST00000465400 1674 ntBASIC16.36■□□□□ 0.21
COL20A1Q9P218 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL20A1Q9P218 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.36■□□□□ 0.21
COL20A1Q9P218 AL390755.1-201ENST00000623716 2027 ntBASIC16.36■□□□□ 0.21
COL20A1Q9P218 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.36■□□□□ 0.21
COL20A1Q9P218 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COL20A1Q9P218 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL20A1Q9P218 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL20A1Q9P218 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC16.36■□□□□ 0.21
COL20A1Q9P218 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL20A1Q9P218 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.35■□□□□ 0.21
COL20A1Q9P218 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC16.35■□□□□ 0.21
COL20A1Q9P218 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL20A1Q9P218 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.35■□□□□ 0.21
COL20A1Q9P218 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL20A1Q9P218 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL20A1Q9P218 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
COL20A1Q9P218 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COL20A1Q9P218 AC012617.1-204ENST00000586340 2305 ntBASIC16.35■□□□□ 0.21
COL20A1Q9P218 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL20A1Q9P218 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
COL20A1Q9P218 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL20A1Q9P218 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.35■□□□□ 0.21
COL20A1Q9P218 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.35■□□□□ 0.21
COL20A1Q9P218 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COL20A1Q9P218 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
COL20A1Q9P218 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.35■□□□□ 0.21
COL20A1Q9P218 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.35■□□□□ 0.21
COL20A1Q9P218 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL20A1Q9P218 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL20A1Q9P218 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL20A1Q9P218 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COL20A1Q9P218 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.35■□□□□ 0.21
COL20A1Q9P218 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COL20A1Q9P218 AP000356.3-201ENST00000382243 753 ntBASIC16.35■□□□□ 0.21
COL20A1Q9P218 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COL20A1Q9P218 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COL20A1Q9P218 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC16.35■□□□□ 0.21
COL20A1Q9P218 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
COL20A1Q9P218 ALG1L13P-202ENST00000519320 584 ntBASIC16.35■□□□□ 0.21
COL20A1Q9P218 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
COL20A1Q9P218 AC140658.4-201ENST00000561990 352 ntBASIC16.35■□□□□ 0.21
COL20A1Q9P218 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC16.35■□□□□ 0.21
COL20A1Q9P218 AC005632.3-201ENST00000605544 308 ntBASIC16.35■□□□□ 0.21
COL20A1Q9P218 AC087045.2-201ENST00000606279 1003 ntBASIC16.35■□□□□ 0.21
COL20A1Q9P218 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.35■□□□□ 0.21
COL20A1Q9P218 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.35■□□□□ 0.21
COL20A1Q9P218 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL20A1Q9P218 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms