Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 AC012618.1-201ENST00000461223 412 ntBASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 AC003686.1-201ENST00000550956 1034 ntBASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 AC105129.2-201ENST00000559536 390 ntBASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 AC068587.10-201ENST00000641210 219 ntBASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 ISCA2P1-201ENST00000425548 448 ntBASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 XBP1P1-201ENST00000436573 652 ntBASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 Z97180.1-201ENST00000445173 988 ntBASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 RHOQP1-201ENST00000555758 579 ntBASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 AC091812.3-201ENST00000621362 345 ntBASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 AC092299.1-201ENST00000632679 757 ntBASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 AC018629.1-201ENST00000623381 1736 ntBASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.74■□□□□ 0.43
HMG20BQ9P0W2 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms