Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.9□□□□□ -0.19
NEUROD4Q9HD90 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 RN7SKP175-201ENST00000408472 289 ntBASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 C2orf27AP3-201ENST00000434123 579 ntBASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 AC022210.1-201ENST00000449856 793 ntBASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 AC007389.4-201ENST00000454674 793 ntBASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 AC025279.2-201ENST00000569730 653 ntBASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 AL354718.3-201ENST00000616414 581 ntBASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 CR382287.1-201ENST00000623954 586 ntBASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NEUROD4Q9HD90 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 AC041040.2-201ENST00000622926 2899 ntBASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 AP001889.1-201ENST00000525414 633 ntBASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 AC106820.3-201ENST00000561653 397 ntBASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 AP005482.1-201ENST00000563722 1273 ntBASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 RN7SL275P-201ENST00000582762 335 ntBASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 CFTRP2-201ENST00000634304 199 ntBASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NEUROD4Q9HD90 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms