Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 AC215219.1-201ENST00000400706 1817 ntBASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 MYADML-201ENST00000474610 2147 ntBASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 PDPK2P-202ENST00000562415 1191 ntBASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 RARRES2P9-201ENST00000565168 469 ntBASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 AC106730.1-201ENST00000566722 1090 ntBASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 AC105021.1-202ENST00000570572 669 ntBASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 AL121912.1-201ENST00000603683 238 ntBASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 AC022400.8-201ENST00000623453 3599 ntBASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC12.03□□□□□ -0.48
SMIM3Q9BZL3 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
SMIM3Q9BZL3 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SMIM3Q9BZL3 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SMIM3Q9BZL3 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SMIM3Q9BZL3 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
SMIM3Q9BZL3 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
SMIM3Q9BZL3 AL121723.1-201ENST00000445194 1519 ntBASIC12.02□□□□□ -0.48
SMIM3Q9BZL3 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SMIM3Q9BZL3 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 AL353705.2-201ENST00000428243 662 ntBASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 SPCS2P4-201ENST00000436160 681 ntBASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 KRT18P2-201ENST00000447938 1258 ntBASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 AL513190.1-201ENST00000621254 727 ntBASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 AC012313.10-201ENST00000623509 926 ntBASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM3Q9BZL3 KRT8P14-201ENST00000414254 1442 ntBASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms