Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.07□□□□□ -0.32
VRK1Q99986 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VRK1Q99986 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.07□□□□□ -0.32
VRK1Q99986 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.07□□□□□ -0.32
VRK1Q99986 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.07□□□□□ -0.32
VRK1Q99986 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.07□□□□□ -0.32
VRK1Q99986 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VRK1Q99986 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.07□□□□□ -0.32
VRK1Q99986 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.07□□□□□ -0.32
VRK1Q99986 AP000812.2-201ENST00000538934 718 ntBASIC13.07□□□□□ -0.32
VRK1Q99986 KRT90P-201ENST00000549264 1064 ntBASIC13.07□□□□□ -0.32
VRK1Q99986 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VRK1Q99986 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.07□□□□□ -0.32
VRK1Q99986 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.07□□□□□ -0.32
VRK1Q99986 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.07□□□□□ -0.32
VRK1Q99986 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
VRK1Q99986 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.07□□□□□ -0.32
VRK1Q99986 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
VRK1Q99986 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VRK1Q99986 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.07□□□□□ -0.32
VRK1Q99986 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.07□□□□□ -0.32
VRK1Q99986 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VRK1Q99986 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.07□□□□□ -0.32
VRK1Q99986 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VRK1Q99986 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VRK1Q99986 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VRK1Q99986 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.07□□□□□ -0.32
VRK1Q99986 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
VRK1Q99986 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.07□□□□□ -0.32
VRK1Q99986 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.07□□□□□ -0.32
VRK1Q99986 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VRK1Q99986 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.07□□□□□ -0.32
VRK1Q99986 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
VRK1Q99986 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VRK1Q99986 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VRK1Q99986 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.07□□□□□ -0.32
VRK1Q99986 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VRK1Q99986 AC092135.3-201ENST00000624151 1846 ntBASIC13.06□□□□□ -0.32
VRK1Q99986 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.06□□□□□ -0.32
VRK1Q99986 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VRK1Q99986 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
VRK1Q99986 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
VRK1Q99986 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VRK1Q99986 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
VRK1Q99986 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
VRK1Q99986 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
VRK1Q99986 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.06□□□□□ -0.32
VRK1Q99986 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VRK1Q99986 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.06□□□□□ -0.32
VRK1Q99986 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VRK1Q99986 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
VRK1Q99986 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VRK1Q99986 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VRK1Q99986 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VRK1Q99986 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.06□□□□□ -0.32
VRK1Q99986 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
VRK1Q99986 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VRK1Q99986 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VRK1Q99986 RNU1-114P-201ENST00000365297 166 ntBASIC13.06□□□□□ -0.32
VRK1Q99986 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VRK1Q99986 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VRK1Q99986 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.06□□□□□ -0.32
VRK1Q99986 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.06□□□□□ -0.32
VRK1Q99986 RPL5P21-201ENST00000404620 815 ntBASIC13.06□□□□□ -0.32
VRK1Q99986 KLF2P2-201ENST00000416807 1039 ntBASIC13.06□□□□□ -0.32
VRK1Q99986 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.06□□□□□ -0.32
VRK1Q99986 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
VRK1Q99986 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.06□□□□□ -0.32
VRK1Q99986 AC114812.1-204ENST00000449669 728 ntBASIC13.06□□□□□ -0.32
VRK1Q99986 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VRK1Q99986 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VRK1Q99986 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.06□□□□□ -0.32
VRK1Q99986 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.06□□□□□ -0.32
VRK1Q99986 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.06□□□□□ -0.32
VRK1Q99986 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.06□□□□□ -0.32
VRK1Q99986 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.06□□□□□ -0.32
VRK1Q99986 AC025279.2-201ENST00000569730 653 ntBASIC13.06□□□□□ -0.32
VRK1Q99986 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.06□□□□□ -0.32
VRK1Q99986 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.06□□□□□ -0.32
VRK1Q99986 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.06□□□□□ -0.32
VRK1Q99986 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.06□□□□□ -0.32
VRK1Q99986 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.06□□□□□ -0.32
VRK1Q99986 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VRK1Q99986 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
VRK1Q99986 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
VRK1Q99986 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC13.06□□□□□ -0.32
VRK1Q99986 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
VRK1Q99986 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VRK1Q99986 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
VRK1Q99986 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.06□□□□□ -0.32
VRK1Q99986 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
VRK1Q99986 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VRK1Q99986 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VRK1Q99986 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VRK1Q99986 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
VRK1Q99986 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
VRK1Q99986 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.06□□□□□ -0.32
VRK1Q99986 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VRK1Q99986 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.05□□□□□ -0.32
VRK1Q99986 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms