Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN18Q99952 PGAM1P11-201ENST00000416729 680 ntBASIC16.42■□□□□ 0.22
PTPN18Q99952 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN18Q99952 KRT18P4-201ENST00000422599 1288 ntBASIC16.42■□□□□ 0.22
PTPN18Q99952 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC16.42■□□□□ 0.22
PTPN18Q99952 AC092573.1-201ENST00000433054 884 ntBASIC16.42■□□□□ 0.22
PTPN18Q99952 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN18Q99952 HNRNPA1P42-201ENST00000458678 957 ntBASIC16.42■□□□□ 0.22
PTPN18Q99952 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN18Q99952 AC025186.1-201ENST00000478174 870 ntBASIC16.42■□□□□ 0.22
PTPN18Q99952 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC16.42■□□□□ 0.22
PTPN18Q99952 RN7SKP155-201ENST00000516031 288 ntBASIC16.42■□□□□ 0.22
PTPN18Q99952 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
PTPN18Q99952 KNOP1P1-201ENST00000542108 989 ntBASIC16.42■□□□□ 0.22
PTPN18Q99952 MAX-218ENST00000557746 571 ntTSL 4 BASIC16.42■□□□□ 0.22
PTPN18Q99952 AC005586.2-201ENST00000563946 837 ntBASIC16.42■□□□□ 0.22
PTPN18Q99952 CES1P2-201ENST00000566467 1242 ntBASIC16.42■□□□□ 0.22
PTPN18Q99952 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC16.42■□□□□ 0.22
PTPN18Q99952 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN18Q99952 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN18Q99952 RARS-210ENST00000626454 177 ntTSL 5 BASIC16.42■□□□□ 0.22
PTPN18Q99952 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PTPN18Q99952 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN18Q99952 CCT8L1P-201ENST00000465400 1674 ntBASIC16.42■□□□□ 0.22
PTPN18Q99952 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN18Q99952 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC16.42■□□□□ 0.22
PTPN18Q99952 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN18Q99952 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PTPN18Q99952 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
PTPN18Q99952 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN18Q99952 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN18Q99952 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN18Q99952 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN18Q99952 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN18Q99952 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN18Q99952 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN18Q99952 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN18Q99952 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PTPN18Q99952 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN18Q99952 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN18Q99952 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN18Q99952 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN18Q99952 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN18Q99952 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.41■□□□□ 0.22
PTPN18Q99952 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PTPN18Q99952 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.41■□□□□ 0.22
PTPN18Q99952 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN18Q99952 FKBP4P8-201ENST00000610931 1369 ntBASIC16.41■□□□□ 0.22
PTPN18Q99952 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.41■□□□□ 0.22
PTPN18Q99952 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN18Q99952 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
PTPN18Q99952 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN18Q99952 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN18Q99952 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN18Q99952 PIFO-201ENST00000369737 746 ntTSL 2 BASIC16.41■□□□□ 0.22
PTPN18Q99952 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PTPN18Q99952 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PTPN18Q99952 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PTPN18Q99952 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN18Q99952 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC16.41■□□□□ 0.22
PTPN18Q99952 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
PTPN18Q99952 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC16.41■□□□□ 0.22
PTPN18Q99952 RN7SL128P-201ENST00000467883 305 ntBASIC16.41■□□□□ 0.22
PTPN18Q99952 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC16.41■□□□□ 0.22
PTPN18Q99952 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC16.41■□□□□ 0.22
PTPN18Q99952 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC16.41■□□□□ 0.22
PTPN18Q99952 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN18Q99952 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN18Q99952 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
PTPN18Q99952 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN18Q99952 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN18Q99952 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN18Q99952 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN18Q99952 LINC00115-201ENST00000473798 1317 ntBASIC16.41■□□□□ 0.22
PTPN18Q99952 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC16.41■□□□□ 0.22
PTPN18Q99952 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
PTPN18Q99952 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN18Q99952 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.41■□□□□ 0.22
PTPN18Q99952 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN18Q99952 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
PTPN18Q99952 AL162727.3-201ENST00000635661 2787 ntBASIC16.4■□□□□ 0.22
PTPN18Q99952 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN18Q99952 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PTPN18Q99952 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN18Q99952 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PTPN18Q99952 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN18Q99952 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN18Q99952 DOC2GP-204ENST00000639052 2548 ntBASIC16.4■□□□□ 0.22
PTPN18Q99952 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.4■□□□□ 0.22
PTPN18Q99952 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN18Q99952 AC138761.6-201ENST00000583997 1423 ntBASIC16.4■□□□□ 0.22
PTPN18Q99952 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN18Q99952 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
PTPN18Q99952 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN18Q99952 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN18Q99952 CTSL-202ENST00000342020 933 ntTSL 2 BASIC16.4■□□□□ 0.22
PTPN18Q99952 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN18Q99952 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC16.4■□□□□ 0.22
PTPN18Q99952 AL161932.2-201ENST00000435436 679 ntBASIC16.4■□□□□ 0.22
PTPN18Q99952 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms