Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 AL132780.4-201ENST00000624870 1135 ntBASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 AC025183.3-201ENST00000623526 1482 ntBASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 HSPA7-201ENST00000445535 1927 ntBASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP2Q96SN8 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 RPS23-204ENST00000507980 836 ntTSL 2 BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 OR5BD1P-201ENST00000532527 817 ntBASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 BAX-205ENST00000391871 687 ntTSL 5 BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 OR2A1-AS1-210ENST00000496968 531 ntBASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 AC138466.5-201ENST00000624002 808 ntBASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.78■□□□□ 0.28
CDK5RAP2Q96SN8 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK5RAP2Q96SN8 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDK5RAP2Q96SN8 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK5RAP2Q96SN8 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK5RAP2Q96SN8 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDK5RAP2Q96SN8 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDK5RAP2Q96SN8 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK5RAP2Q96SN8 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK5RAP2Q96SN8 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK5RAP2Q96SN8 TUBB4AP1-201ENST00000450755 1325 ntBASIC16.77■□□□□ 0.28
CDK5RAP2Q96SN8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CDK5RAP2Q96SN8 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC16.77■□□□□ 0.28
CDK5RAP2Q96SN8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK5RAP2Q96SN8 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms