Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC11.94□□□□□ -0.5
RAB40CQ96S21 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
RAB40CQ96S21 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC11.94□□□□□ -0.5
RAB40CQ96S21 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RAB40CQ96S21 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RAB40CQ96S21 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
RAB40CQ96S21 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
RAB40CQ96S21 TUBB8P4-201ENST00000511806 1324 ntBASIC11.94□□□□□ -0.5
RAB40CQ96S21 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RAB40CQ96S21 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
RAB40CQ96S21 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB40CQ96S21 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB40CQ96S21 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB40CQ96S21 AC004241.5-201ENST00000623870 2448 ntBASIC11.94□□□□□ -0.5
RAB40CQ96S21 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB40CQ96S21 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB40CQ96S21 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
RAB40CQ96S21 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RAB40CQ96S21 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
RAB40CQ96S21 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC11.94□□□□□ -0.5
RAB40CQ96S21 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC11.94□□□□□ -0.5
RAB40CQ96S21 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RAB40CQ96S21 SLBP-205ENST00000488267 987 ntTSL 2 BASIC11.94□□□□□ -0.5
RAB40CQ96S21 HLA-J-203ENST00000494367 1087 ntBASIC11.94□□□□□ -0.5
RAB40CQ96S21 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC11.94□□□□□ -0.5
RAB40CQ96S21 AC010336.2-201ENST00000564226 506 ntBASIC11.94□□□□□ -0.5
RAB40CQ96S21 AC004449.1-201ENST00000564240 433 ntBASIC11.94□□□□□ -0.5
RAB40CQ96S21 AP001160.2-201ENST00000596071 487 ntBASIC11.94□□□□□ -0.5
RAB40CQ96S21 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC11.94□□□□□ -0.5
RAB40CQ96S21 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC11.94□□□□□ -0.5
RAB40CQ96S21 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB40CQ96S21 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB40CQ96S21 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB40CQ96S21 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
RAB40CQ96S21 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC11.94□□□□□ -0.5
RAB40CQ96S21 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB40CQ96S21 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RAB40CQ96S21 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
RAB40CQ96S21 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC11.94□□□□□ -0.5
RAB40CQ96S21 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC11.94□□□□□ -0.5
RAB40CQ96S21 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RAB40CQ96S21 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
RAB40CQ96S21 AC072061.1-201ENST00000569710 2234 ntBASIC11.94□□□□□ -0.5
RAB40CQ96S21 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC11.94□□□□□ -0.5
RAB40CQ96S21 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB40CQ96S21 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB40CQ96S21 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC11.94□□□□□ -0.5
RAB40CQ96S21 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAB40CQ96S21 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
RAB40CQ96S21 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC11.93□□□□□ -0.5
RAB40CQ96S21 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC11.93□□□□□ -0.5
RAB40CQ96S21 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAB40CQ96S21 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
RAB40CQ96S21 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RAB40CQ96S21 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC11.93□□□□□ -0.5
RAB40CQ96S21 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAB40CQ96S21 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAB40CQ96S21 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAB40CQ96S21 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAB40CQ96S21 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
RAB40CQ96S21 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAB40CQ96S21 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAB40CQ96S21 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
RAB40CQ96S21 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC11.93□□□□□ -0.5
RAB40CQ96S21 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RAB40CQ96S21 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RAB40CQ96S21 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RAB40CQ96S21 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAB40CQ96S21 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
RAB40CQ96S21 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RAB40CQ96S21 TSEN15P1-201ENST00000423257 515 ntBASIC11.93□□□□□ -0.5
RAB40CQ96S21 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC11.93□□□□□ -0.5
RAB40CQ96S21 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC11.93□□□□□ -0.5
RAB40CQ96S21 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC11.93□□□□□ -0.5
RAB40CQ96S21 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RAB40CQ96S21 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RAB40CQ96S21 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RAB40CQ96S21 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RAB40CQ96S21 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC11.93□□□□□ -0.5
RAB40CQ96S21 AL512356.2-201ENST00000546955 174 ntBASIC11.93□□□□□ -0.5
RAB40CQ96S21 AC025678.2-201ENST00000562061 970 ntBASIC11.93□□□□□ -0.5
RAB40CQ96S21 MIR497HG-202ENST00000572453 3838 ntBASIC11.93□□□□□ -0.5
RAB40CQ96S21 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAB40CQ96S21 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC11.93□□□□□ -0.5
RAB40CQ96S21 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC11.93□□□□□ -0.5
RAB40CQ96S21 AGAP10P-201ENST00000454844 2418 ntBASIC11.93□□□□□ -0.5
RAB40CQ96S21 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
RAB40CQ96S21 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAB40CQ96S21 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC11.93□□□□□ -0.5
RAB40CQ96S21 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RAB40CQ96S21 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC11.93□□□□□ -0.5
RAB40CQ96S21 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAB40CQ96S21 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAB40CQ96S21 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC11.93□□□□□ -0.5
RAB40CQ96S21 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC11.93□□□□□ -0.5
RAB40CQ96S21 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
RAB40CQ96S21 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RAB40CQ96S21 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC11.93□□□□□ -0.5
RAB40CQ96S21 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAB40CQ96S21 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms