Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 GHET1-201ENST00000627071 1906 ntBASIC13.84□□□□□ -0.19
NR1H4Q96RI1 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 AC092117.1-201ENST00000621230 3250 ntBASIC13.84□□□□□ -0.19
NR1H4Q96RI1 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 KRT18P8-201ENST00000581937 1246 ntBASIC13.84□□□□□ -0.19
NR1H4Q96RI1 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 AC023141.13-201ENST00000604991 943 ntBASIC13.84□□□□□ -0.19
NR1H4Q96RI1 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NR1H4Q96RI1 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NR1H4Q96RI1 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.19
NR1H4Q96RI1 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
NR1H4Q96RI1 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 PI4KAP2-201ENST00000360806 2080 ntBASIC13.83□□□□□ -0.2
NR1H4Q96RI1 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 KRT126P-201ENST00000549467 1181 ntBASIC13.83□□□□□ -0.2
NR1H4Q96RI1 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 AC096734.2-201ENST00000562054 433 ntBASIC13.83□□□□□ -0.2
NR1H4Q96RI1 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC13.83□□□□□ -0.2
NR1H4Q96RI1 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 BCAR1-209ENST00000546196 1340 ntBASIC13.83□□□□□ -0.2
NR1H4Q96RI1 AL360270.3-201ENST00000609118 1348 ntBASIC13.83□□□□□ -0.2
NR1H4Q96RI1 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NR1H4Q96RI1 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms