Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 AC092978.1-202ENST00000637590 1327 ntBASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 AP000356.3-201ENST00000382243 753 ntBASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 RN7SL258P-201ENST00000478664 300 ntBASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 IQSEC3P1-201ENST00000538799 536 ntBASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 PHBP15-201ENST00000574228 665 ntBASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 NAT9-220ENST00000582870 896 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 HPN-206ENST00000597419 1212 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC85AQ96PX6 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC85AQ96PX6 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC18.08■□□□□ 0.49
CCDC85AQ96PX6 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC18.08■□□□□ 0.49
CCDC85AQ96PX6 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC18.08■□□□□ 0.49
CCDC85AQ96PX6 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC85AQ96PX6 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
CCDC85AQ96PX6 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC85AQ96PX6 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CCDC85AQ96PX6 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC85AQ96PX6 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC85AQ96PX6 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC85AQ96PX6 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CCDC85AQ96PX6 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC85AQ96PX6 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC85AQ96PX6 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC18.08■□□□□ 0.48
CCDC85AQ96PX6 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC85AQ96PX6 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC85AQ96PX6 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC85AQ96PX6 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CCDC85AQ96PX6 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC85AQ96PX6 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC18.08■□□□□ 0.48
CCDC85AQ96PX6 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC18.08■□□□□ 0.48
CCDC85AQ96PX6 AC124068.2-201ENST00000569473 1109 ntBASIC18.08■□□□□ 0.48
CCDC85AQ96PX6 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC85AQ96PX6 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC85AQ96PX6 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC85AQ96PX6 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CCDC85AQ96PX6 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CCDC85AQ96PX6 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC85AQ96PX6 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC85AQ96PX6 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC85AQ96PX6 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC85AQ96PX6 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC85AQ96PX6 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC85AQ96PX6 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CCDC85AQ96PX6 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC85AQ96PX6 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC85AQ96PX6 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC85AQ96PX6 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CCDC85AQ96PX6 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC85AQ96PX6 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC85AQ96PX6 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC85AQ96PX6 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms