Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 AC006122.1-201ENST00000493323 440 ntBASIC12.15□□□□□ -0.46
GAFA1Q96PS6 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 FAM8A2P-201ENST00000528813 1142 ntBASIC12.15□□□□□ -0.46
GAFA1Q96PS6 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 AL160314.3-201ENST00000556041 767 ntBASIC12.15□□□□□ -0.46
GAFA1Q96PS6 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.15□□□□□ -0.46
GAFA1Q96PS6 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 AC018735.1-201ENST00000437208 1502 ntBASIC12.15□□□□□ -0.46
GAFA1Q96PS6 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 HSPA7-201ENST00000445535 1927 ntBASIC12.15□□□□□ -0.46
GAFA1Q96PS6 MBLAC2-202ENST00000514906 1936 ntBASIC12.15□□□□□ -0.46
GAFA1Q96PS6 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC12.15□□□□□ -0.47
GAFA1Q96PS6 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
GAFA1Q96PS6 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.15□□□□□ -0.47
GAFA1Q96PS6 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
GAFA1Q96PS6 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
GAFA1Q96PS6 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.15□□□□□ -0.47
GAFA1Q96PS6 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 AC144522.1-201ENST00000625111 1658 ntBASIC12.14□□□□□ -0.47
GAFA1Q96PS6 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.14□□□□□ -0.47
GAFA1Q96PS6 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 AC244107.1-201ENST00000442033 332 ntBASIC12.14□□□□□ -0.47
GAFA1Q96PS6 PFN1P12-201ENST00000455938 534 ntBASIC12.14□□□□□ -0.47
GAFA1Q96PS6 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 RPL18P13-201ENST00000478088 569 ntBASIC12.14□□□□□ -0.47
GAFA1Q96PS6 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 AC005324.6-201ENST00000587972 613 ntBASIC12.14□□□□□ -0.47
GAFA1Q96PS6 AC008805.1-201ENST00000590892 364 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms