Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 USP32P1-208ENST00000506594 1164 ntBASIC12.87□□□□□ -0.35
SPTSSAQ969W0 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 AC138951.2-201ENST00000623455 1161 ntBASIC12.87□□□□□ -0.35
SPTSSAQ969W0 PFAS-212ENST00000625942 396 ntTSL 5 BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.87□□□□□ -0.35
SPTSSAQ969W0 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 EDF1-203ENST00000371649 790 ntTSL 2 BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 KRT17P7-201ENST00000451704 1104 ntBASIC12.86□□□□□ -0.35
SPTSSAQ969W0 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 AL590640.2-201ENST00000457038 527 ntBASIC12.86□□□□□ -0.35
SPTSSAQ969W0 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 FTH1P14-201ENST00000482930 551 ntBASIC12.86□□□□□ -0.35
SPTSSAQ969W0 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 MIR3197-201ENST00000582241 73 ntBASIC12.86□□□□□ -0.35
SPTSSAQ969W0 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 AC006453.4-201ENST00000636949 1252 ntBASIC12.86□□□□□ -0.35
SPTSSAQ969W0 AC002472.3-201ENST00000640124 621 ntBASIC12.86□□□□□ -0.35
SPTSSAQ969W0 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.86□□□□□ -0.35
SPTSSAQ969W0 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms