Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 PTENP1-202ENST00000532280 3996 ntBASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 AC006504.5-208ENST00000588784 2401 ntBASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 AL512384.1-201ENST00000406683 331 ntBASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 AL391280.1-201ENST00000506969 1062 ntBASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 RNA5SP486-201ENST00000515961 83 ntBASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 AC233724.13-201ENST00000598383 410 ntBASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 TP73-201ENST00000346387 4854 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP1Q8TDR0 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 RN7SL832P-201ENST00000607781 1756 ntBASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 AC090505.1-201ENST00000430515 1834 ntBASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 AL590640.2-201ENST00000457038 527 ntBASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 GNRHR2-203ENST00000581100 1187 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms