Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 AC079178.1-201ENST00000420915 656 ntBASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 AC108725.1-201ENST00000495472 409 ntBASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 MIR4683-201ENST00000579659 81 ntBASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 AL359881.3-201ENST00000602640 1721 ntBASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 RPSAP36-202ENST00000494591 1261 ntBASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 AC244157.2-201ENST00000616239 1006 ntBASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 AC002472.3-201ENST00000640124 621 ntBASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC17.12■□□□□ 0.33
SMARCC2Q8TAQ2 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 CHMP1AP1-201ENST00000445563 662 ntBASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 HIST2H2BB-201ENST00000449108 381 ntBASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms