Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BEST4Q8NFU0 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 AC004461.1-201ENST00000412461 403 ntBASIC12.73□□□□□ -0.37
BEST4Q8NFU0 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 AC093520.2-201ENST00000561830 333 ntBASIC12.73□□□□□ -0.37
BEST4Q8NFU0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.73□□□□□ -0.37
BEST4Q8NFU0 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 AP002761.4-201ENST00000565433 3361 ntBASIC12.73□□□□□ -0.37
BEST4Q8NFU0 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 VENTXP1-201ENST00000569334 2716 ntBASIC12.73□□□□□ -0.37
BEST4Q8NFU0 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
BEST4Q8NFU0 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 AC000095.1-201ENST00000603208 874 ntBASIC12.72□□□□□ -0.37
BEST4Q8NFU0 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms