Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 AC020910.6-201ENST00000623084 1459 ntBASIC13.74□□□□□ -0.21
NUP43Q8NFH3 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 KRT8P28-201ENST00000433288 1390 ntBASIC13.73□□□□□ -0.21
NUP43Q8NFH3 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 AL358472.3-201ENST00000608147 415 ntBASIC13.73□□□□□ -0.21
NUP43Q8NFH3 AC012645.4-201ENST00000610691 1061 ntBASIC13.73□□□□□ -0.21
NUP43Q8NFH3 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 PDIA3P1-201ENST00000471856 1510 ntBASIC13.73□□□□□ -0.21
NUP43Q8NFH3 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.73□□□□□ -0.21
NUP43Q8NFH3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms