Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 FAM21FP-201ENST00000426241 1131 ntBASIC12.86□□□□□ -0.35
CPEB3Q8NE35 YBX1P6-201ENST00000442962 1002 ntBASIC12.86□□□□□ -0.35
CPEB3Q8NE35 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 AL008721.1-201ENST00000609964 604 ntBASIC12.86□□□□□ -0.35
CPEB3Q8NE35 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.86□□□□□ -0.35
CPEB3Q8NE35 AL590440.2-201ENST00000641973 1595 ntBASIC12.86□□□□□ -0.35
CPEB3Q8NE35 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 HIST2H2BB-201ENST00000449108 381 ntBASIC12.85□□□□□ -0.35
CPEB3Q8NE35 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 DUX4L45-201ENST00000566406 1057 ntBASIC12.85□□□□□ -0.35
CPEB3Q8NE35 MIR4741-201ENST00000579822 90 ntBASIC12.85□□□□□ -0.35
CPEB3Q8NE35 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 AL136301.1-201ENST00000615830 422 ntBASIC12.85□□□□□ -0.35
CPEB3Q8NE35 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
CPEB3Q8NE35 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms