Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 AC007881.3-201ENST00000608897 607 ntBASIC15.58■□□□□ 0.08
RNF135Q8IUD6 AC138466.4-201ENST00000623965 852 ntBASIC15.58■□□□□ 0.08
RNF135Q8IUD6 AL132780.4-201ENST00000624870 1135 ntBASIC15.58■□□□□ 0.08
RNF135Q8IUD6 AL603764.1-201ENST00000636452 321 ntBASIC15.58■□□□□ 0.08
RNF135Q8IUD6 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.58■□□□□ 0.08
RNF135Q8IUD6 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 RPL8P2-201ENST00000430538 502 ntBASIC15.57■□□□□ 0.08
RNF135Q8IUD6 FAU-202ENST00000434372 533 ntTSL 2 BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 AL139008.1-201ENST00000437894 228 ntBASIC15.57■□□□□ 0.08
RNF135Q8IUD6 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 MESTP3-201ENST00000503460 968 ntBASIC15.57■□□□□ 0.08
RNF135Q8IUD6 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 STUB1-204ENST00000564370 875 ntTSL 2 BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 AC026803.1-201ENST00000569130 274 ntBASIC15.57■□□□□ 0.08
RNF135Q8IUD6 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 FAM90A2P-201ENST00000511144 1395 ntBASIC15.57■□□□□ 0.08
RNF135Q8IUD6 FAM90A25P-201ENST00000528404 1395 ntBASIC15.57■□□□□ 0.08
RNF135Q8IUD6 CAP2P1-201ENST00000557743 1390 ntBASIC15.57■□□□□ 0.08
RNF135Q8IUD6 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.57■□□□□ 0.08
RNF135Q8IUD6 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 REXO1L5P-201ENST00000622260 2098 ntBASIC15.56■□□□□ 0.08
RNF135Q8IUD6 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 AC106881.1-201ENST00000605849 3329 ntBASIC15.56■□□□□ 0.08
RNF135Q8IUD6 AC239868.1-201ENST00000369385 493 ntBASIC15.56■□□□□ 0.08
RNF135Q8IUD6 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 HLA-J-204ENST00000495278 958 ntBASIC15.56■□□□□ 0.08
RNF135Q8IUD6 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.56■□□□□ 0.08
RNF135Q8IUD6 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms