Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 MSTO2P-201ENST00000314835 1709 ntBASIC13.69□□□□□ -0.22
REEP3Q6NUK4 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.69□□□□□ -0.22
REEP3Q6NUK4 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 PTENP1-202ENST00000532280 3996 ntBASIC13.68□□□□□ -0.22
REEP3Q6NUK4 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 PIN1P1-201ENST00000412108 996 ntBASIC13.68□□□□□ -0.22
REEP3Q6NUK4 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 ACTG1P3-201ENST00000431775 1114 ntBASIC13.68□□□□□ -0.22
REEP3Q6NUK4 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 AL391280.1-201ENST00000506969 1062 ntBASIC13.68□□□□□ -0.22
REEP3Q6NUK4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 AL031595.1-201ENST00000623969 4709 ntBASIC13.68□□□□□ -0.22
REEP3Q6NUK4 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
REEP3Q6NUK4 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
REEP3Q6NUK4 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
REEP3Q6NUK4 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.67□□□□□ -0.22
REEP3Q6NUK4 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.67□□□□□ -0.22
REEP3Q6NUK4 TUBB8P4-201ENST00000511806 1324 ntBASIC13.67□□□□□ -0.22
REEP3Q6NUK4 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
REEP3Q6NUK4 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.67□□□□□ -0.22
REEP3Q6NUK4 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.67□□□□□ -0.22
REEP3Q6NUK4 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.67□□□□□ -0.22
REEP3Q6NUK4 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.67□□□□□ -0.22
REEP3Q6NUK4 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
REEP3Q6NUK4 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
REEP3Q6NUK4 AL138709.1-201ENST00000614840 1693 ntBASIC13.67□□□□□ -0.22
REEP3Q6NUK4 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
REEP3Q6NUK4 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
REEP3Q6NUK4 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
REEP3Q6NUK4 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
REEP3Q6NUK4 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
REEP3Q6NUK4 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
REEP3Q6NUK4 AC131212.3-201ENST00000624087 4219 ntBASIC13.67□□□□□ -0.22
REEP3Q6NUK4 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.67□□□□□ -0.22
REEP3Q6NUK4 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
REEP3Q6NUK4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
REEP3Q6NUK4 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
REEP3Q6NUK4 TPM3P8-201ENST00000330554 643 ntBASIC13.67□□□□□ -0.22
REEP3Q6NUK4 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
REEP3Q6NUK4 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
REEP3Q6NUK4 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.67□□□□□ -0.22
REEP3Q6NUK4 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
REEP3Q6NUK4 RN7SKP175-201ENST00000408472 289 ntBASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms