Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 PDIA3P2-201ENST00000428073 158 ntBASIC20.04■□□□□ 0.8
CDCA8Q53HL2 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDCA8Q53HL2 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CDCA8Q53HL2 RN7SL258P-201ENST00000478664 300 ntBASIC20.04■□□□□ 0.8
CDCA8Q53HL2 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC20.04■□□□□ 0.8
CDCA8Q53HL2 NUP210P1-202ENST00000504322 710 ntBASIC20.04■□□□□ 0.8
CDCA8Q53HL2 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC20.04■□□□□ 0.8
CDCA8Q53HL2 RN7SL574P-201ENST00000581512 297 ntBASIC20.04■□□□□ 0.8
CDCA8Q53HL2 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC20.04■□□□□ 0.8
CDCA8Q53HL2 IRF3-215ENST00000596822 823 ntTSL 3 BASIC20.04■□□□□ 0.8
CDCA8Q53HL2 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC20.04■□□□□ 0.8
CDCA8Q53HL2 AL353770.1-201ENST00000614915 403 ntBASIC20.04■□□□□ 0.8
CDCA8Q53HL2 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CDCA8Q53HL2 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDCA8Q53HL2 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDCA8Q53HL2 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDCA8Q53HL2 PKD1P5-201ENST00000532415 10291 ntBASIC20.04■□□□□ 0.8
CDCA8Q53HL2 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 PFN2-206ENST00000461930 606 ntTSL 4 BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 RN7SL530P-201ENST00000485097 298 ntBASIC20.03■□□□□ 0.8
CDCA8Q53HL2 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 CHMP4BP1-201ENST00000556017 588 ntBASIC20.03■□□□□ 0.8
CDCA8Q53HL2 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 AC020922.3-201ENST00000595064 547 ntBASIC20.03■□□□□ 0.8
CDCA8Q53HL2 HPN-206ENST00000597419 1212 ntTSL 5 BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 AC106872.11-201ENST00000605838 421 ntBASIC20.03■□□□□ 0.8
CDCA8Q53HL2 AL021578.1-201ENST00000613646 709 ntBASIC20.03■□□□□ 0.8
CDCA8Q53HL2 PPA1-206ENST00000625364 644 ntTSL 5 BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 AC106881.1-201ENST00000605849 3329 ntBASIC20.03■□□□□ 0.8
CDCA8Q53HL2 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA8Q53HL2 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CDCA8Q53HL2 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDCA8Q53HL2 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDCA8Q53HL2 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDCA8Q53HL2 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDCA8Q53HL2 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CDCA8Q53HL2 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
CDCA8Q53HL2 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDCA8Q53HL2 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CDCA8Q53HL2 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CDCA8Q53HL2 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDCA8Q53HL2 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDCA8Q53HL2 RNA5SP359-201ENST00000364838 113 ntBASIC20.02■□□□□ 0.8
CDCA8Q53HL2 ELK2AP-201ENST00000392510 1007 ntBASIC20.02■□□□□ 0.8
CDCA8Q53HL2 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC20.02■□□□□ 0.8
CDCA8Q53HL2 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDCA8Q53HL2 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC20.02■□□□□ 0.8
CDCA8Q53HL2 RN7SL720P-201ENST00000488178 304 ntBASIC20.02■□□□□ 0.8
CDCA8Q53HL2 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC20.02■□□□□ 0.8
CDCA8Q53HL2 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDCA8Q53HL2 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC20.02■□□□□ 0.8
CDCA8Q53HL2 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC20.02■□□□□ 0.8
CDCA8Q53HL2 MIR4754-201ENST00000582477 89 ntBASIC20.02■□□□□ 0.8
CDCA8Q53HL2 CENPX-208ENST00000584347 799 ntTSL 2 BASIC20.02■□□□□ 0.8
CDCA8Q53HL2 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC20.02■□□□□ 0.8
CDCA8Q53HL2 AC097724.1-201ENST00000609581 426 ntBASIC20.02■□□□□ 0.8
CDCA8Q53HL2 AL022334.2-201ENST00000610000 484 ntBASIC20.02■□□□□ 0.8
CDCA8Q53HL2 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC20.02■□□□□ 0.8
CDCA8Q53HL2 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDCA8Q53HL2 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDCA8Q53HL2 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC20.02■□□□□ 0.8
CDCA8Q53HL2 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDCA8Q53HL2 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDCA8Q53HL2 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDCA8Q53HL2 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDCA8Q53HL2 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDCA8Q53HL2 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CDCA8Q53HL2 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC20.02■□□□□ 0.79
CDCA8Q53HL2 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CDCA8Q53HL2 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms