Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.12□□□□□ -0.47
SRPXP78539 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SRPXP78539 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.12□□□□□ -0.47
SRPXP78539 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRPXP78539 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRPXP78539 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.12□□□□□ -0.47
SRPXP78539 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.12□□□□□ -0.47
SRPXP78539 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.12□□□□□ -0.47
SRPXP78539 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRPXP78539 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
SRPXP78539 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRPXP78539 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.12□□□□□ -0.47
SRPXP78539 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
SRPXP78539 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SRPXP78539 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.12□□□□□ -0.47
SRPXP78539 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SRPXP78539 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.12□□□□□ -0.47
SRPXP78539 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SRPXP78539 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRPXP78539 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRPXP78539 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.12□□□□□ -0.47
SRPXP78539 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
SRPXP78539 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRPXP78539 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SRPXP78539 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
SRPXP78539 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.12□□□□□ -0.47
SRPXP78539 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.12□□□□□ -0.47
SRPXP78539 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
SRPXP78539 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC12.12□□□□□ -0.47
SRPXP78539 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC12.12□□□□□ -0.47
SRPXP78539 DNAJB3-201ENST00000446806 729 ntBASIC12.12□□□□□ -0.47
SRPXP78539 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRPXP78539 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.12□□□□□ -0.47
SRPXP78539 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.12□□□□□ -0.47
SRPXP78539 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SRPXP78539 MEIS3P1-201ENST00000495167 958 ntBASIC12.12□□□□□ -0.47
SRPXP78539 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.12□□□□□ -0.47
SRPXP78539 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
SRPXP78539 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRPXP78539 AC131206.1-201ENST00000538078 1211 ntBASIC12.12□□□□□ -0.47
SRPXP78539 SORD2P-201ENST00000558556 1069 ntBASIC12.12□□□□□ -0.47
SRPXP78539 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.12□□□□□ -0.47
SRPXP78539 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.12□□□□□ -0.47
SRPXP78539 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRPXP78539 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRPXP78539 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SRPXP78539 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRPXP78539 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRPXP78539 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.12□□□□□ -0.47
SRPXP78539 KHSRPP1-201ENST00000427983 1768 ntBASIC12.12□□□□□ -0.47
SRPXP78539 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRPXP78539 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.12□□□□□ -0.47
SRPXP78539 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRPXP78539 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRPXP78539 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.12□□□□□ -0.47
SRPXP78539 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC12.12□□□□□ -0.47
SRPXP78539 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.12□□□□□ -0.47
SRPXP78539 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SRPXP78539 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
SRPXP78539 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRPXP78539 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRPXP78539 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SRPXP78539 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SRPXP78539 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SRPXP78539 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SRPXP78539 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SRPXP78539 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.11□□□□□ -0.47
SRPXP78539 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.11□□□□□ -0.47
SRPXP78539 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SRPXP78539 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SRPXP78539 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SRPXP78539 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SRPXP78539 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.11□□□□□ -0.47
SRPXP78539 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
SRPXP78539 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
SRPXP78539 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SRPXP78539 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SRPXP78539 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SRPXP78539 AL805961.2-201ENST00000642139 4817 ntBASIC12.11□□□□□ -0.47
SRPXP78539 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.11□□□□□ -0.47
SRPXP78539 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SRPXP78539 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SRPXP78539 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.11□□□□□ -0.47
SRPXP78539 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
SRPXP78539 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.11□□□□□ -0.47
SRPXP78539 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.11□□□□□ -0.47
SRPXP78539 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC12.11□□□□□ -0.47
SRPXP78539 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.11□□□□□ -0.47
SRPXP78539 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.11□□□□□ -0.47
SRPXP78539 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.11□□□□□ -0.47
SRPXP78539 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.11□□□□□ -0.47
SRPXP78539 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.11□□□□□ -0.47
SRPXP78539 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.11□□□□□ -0.47
SRPXP78539 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
SRPXP78539 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.11□□□□□ -0.47
SRPXP78539 SPDYE12P-201ENST00000618416 771 ntBASIC12.11□□□□□ -0.47
SRPXP78539 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SRPXP78539 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.11□□□□□ -0.47
SRPXP78539 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SRPXP78539 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms