Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCNA1P78396 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCNA1P78396 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCNA1P78396 BRD7P5-201ENST00000299197 1822 ntBASIC16.49■□□□□ 0.23
CCNA1P78396 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCNA1P78396 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCNA1P78396 PAUPAR-201ENST00000630360 2965 ntBASIC16.49■□□□□ 0.23
CCNA1P78396 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCNA1P78396 FTX-216ENST00000638985 1367 ntTSL 5 BASIC16.49■□□□□ 0.23
CCNA1P78396 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCNA1P78396 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
CCNA1P78396 MIR600HG-201ENST00000449175 5984 ntBASIC16.49■□□□□ 0.23
CCNA1P78396 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.49■□□□□ 0.23
CCNA1P78396 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCNA1P78396 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.49■□□□□ 0.23
CCNA1P78396 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.49■□□□□ 0.23
CCNA1P78396 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.48■□□□□ 0.23
CCNA1P78396 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC16.48■□□□□ 0.23
CCNA1P78396 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCNA1P78396 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCNA1P78396 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCNA1P78396 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.48■□□□□ 0.23
CCNA1P78396 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCNA1P78396 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.48■□□□□ 0.23
CCNA1P78396 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCNA1P78396 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCNA1P78396 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCNA1P78396 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCNA1P78396 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC16.48■□□□□ 0.23
CCNA1P78396 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCNA1P78396 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC16.48■□□□□ 0.23
CCNA1P78396 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CCNA1P78396 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCNA1P78396 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC16.48■□□□□ 0.23
CCNA1P78396 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CCNA1P78396 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC16.48■□□□□ 0.23
CCNA1P78396 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC16.48■□□□□ 0.23
CCNA1P78396 MIR5196-201ENST00000578146 115 ntBASIC16.48■□□□□ 0.23
CCNA1P78396 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC16.48■□□□□ 0.23
CCNA1P78396 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CCNA1P78396 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
CCNA1P78396 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCNA1P78396 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCNA1P78396 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCNA1P78396 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.48■□□□□ 0.23
CCNA1P78396 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CCNA1P78396 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCNA1P78396 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCNA1P78396 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCNA1P78396 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCNA1P78396 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCNA1P78396 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCNA1P78396 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CCNA1P78396 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCNA1P78396 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCNA1P78396 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCNA1P78396 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CCNA1P78396 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CCNA1P78396 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCNA1P78396 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCNA1P78396 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC16.47■□□□□ 0.23
CCNA1P78396 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.47■□□□□ 0.23
CCNA1P78396 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCNA1P78396 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCNA1P78396 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.47■□□□□ 0.23
CCNA1P78396 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCNA1P78396 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC16.47■□□□□ 0.23
CCNA1P78396 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CCNA1P78396 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCNA1P78396 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC16.47■□□□□ 0.23
CCNA1P78396 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC16.47■□□□□ 0.23
CCNA1P78396 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC16.47■□□□□ 0.23
CCNA1P78396 NEU3-207ENST00000534628 746 ntTSL 2 BASIC16.47■□□□□ 0.23
CCNA1P78396 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC16.47■□□□□ 0.23
CCNA1P78396 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC16.47■□□□□ 0.23
CCNA1P78396 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCNA1P78396 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCNA1P78396 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.47■□□□□ 0.23
CCNA1P78396 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCNA1P78396 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC16.47■□□□□ 0.23
CCNA1P78396 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.47■□□□□ 0.23
CCNA1P78396 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCNA1P78396 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.47■□□□□ 0.23
CCNA1P78396 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCNA1P78396 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCNA1P78396 AC138035.3-201ENST00000622706 2791 ntBASIC16.47■□□□□ 0.23
CCNA1P78396 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CCNA1P78396 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCNA1P78396 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCNA1P78396 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CCNA1P78396 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCNA1P78396 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCNA1P78396 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CCNA1P78396 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCNA1P78396 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCNA1P78396 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCNA1P78396 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.46■□□□□ 0.23
CCNA1P78396 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCNA1P78396 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CCNA1P78396 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms