Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
UBA52P62987 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.77□□□□□ -0.37
UBA52P62987 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBA52P62987 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBA52P62987 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
UBA52P62987 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBA52P62987 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.77□□□□□ -0.37
UBA52P62987 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
UBA52P62987 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBA52P62987 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
UBA52P62987 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBA52P62987 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBA52P62987 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBA52P62987 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.77□□□□□ -0.37
UBA52P62987 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC12.77□□□□□ -0.37
UBA52P62987 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBA52P62987 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
UBA52P62987 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBA52P62987 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
UBA52P62987 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UBA52P62987 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.76□□□□□ -0.37
UBA52P62987 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
UBA52P62987 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBA52P62987 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UBA52P62987 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.76□□□□□ -0.37
UBA52P62987 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBA52P62987 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBA52P62987 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC12.76□□□□□ -0.37
UBA52P62987 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBA52P62987 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBA52P62987 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
UBA52P62987 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBA52P62987 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBA52P62987 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
UBA52P62987 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
UBA52P62987 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBA52P62987 AL162726.2-201ENST00000438986 1017 ntBASIC12.76□□□□□ -0.37
UBA52P62987 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UBA52P62987 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.76□□□□□ -0.37
UBA52P62987 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
UBA52P62987 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
UBA52P62987 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.76□□□□□ -0.37
UBA52P62987 MFF-223ENST00000524634 647 ntTSL 2 BASIC12.76□□□□□ -0.37
UBA52P62987 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
UBA52P62987 SUOX-214ENST00000551841 906 ntTSL 3 BASIC12.76□□□□□ -0.37
UBA52P62987 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.76□□□□□ -0.37
UBA52P62987 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.76□□□□□ -0.37
UBA52P62987 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.76□□□□□ -0.37
UBA52P62987 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.76□□□□□ -0.37
UBA52P62987 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBA52P62987 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBA52P62987 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
UBA52P62987 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBA52P62987 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBA52P62987 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.76□□□□□ -0.37
UBA52P62987 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
UBA52P62987 AC018529.2-202ENST00000611482 3087 ntBASIC12.76□□□□□ -0.37
UBA52P62987 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UBA52P62987 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UBA52P62987 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBA52P62987 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBA52P62987 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UBA52P62987 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.76□□□□□ -0.37
UBA52P62987 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.76□□□□□ -0.37
UBA52P62987 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBA52P62987 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UBA52P62987 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UBA52P62987 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
UBA52P62987 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
UBA52P62987 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UBA52P62987 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
UBA52P62987 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.75□□□□□ -0.37
UBA52P62987 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
UBA52P62987 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
UBA52P62987 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.75□□□□□ -0.37
UBA52P62987 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
UBA52P62987 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UBA52P62987 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
UBA52P62987 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
UBA52P62987 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UBA52P62987 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
UBA52P62987 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UBA52P62987 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
UBA52P62987 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
UBA52P62987 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UBA52P62987 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
UBA52P62987 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
UBA52P62987 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
UBA52P62987 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC12.75□□□□□ -0.37
UBA52P62987 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
UBA52P62987 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
UBA52P62987 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UBA52P62987 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
UBA52P62987 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.75□□□□□ -0.37
UBA52P62987 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
UBA52P62987 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.75□□□□□ -0.37
UBA52P62987 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.75□□□□□ -0.37
UBA52P62987 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.75□□□□□ -0.37
UBA52P62987 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.75□□□□□ -0.37
UBA52P62987 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms