Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S2P59780 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S2P59780 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S2P59780 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.63□□□□□ -0.39
AP3S2P59780 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
AP3S2P59780 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
AP3S2P59780 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S2P59780 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S2P59780 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S2P59780 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S2P59780 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S2P59780 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S2P59780 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S2P59780 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S2P59780 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
AP3S2P59780 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.63□□□□□ -0.39
AP3S2P59780 AL645937.2-201ENST00000396808 931 ntBASIC12.63□□□□□ -0.39
AP3S2P59780 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC12.63□□□□□ -0.39
AP3S2P59780 AC136604.1-202ENST00000425471 771 ntBASIC12.63□□□□□ -0.39
AP3S2P59780 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.63□□□□□ -0.39
AP3S2P59780 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.63□□□□□ -0.39
AP3S2P59780 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.63□□□□□ -0.39
AP3S2P59780 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
AP3S2P59780 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
AP3S2P59780 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC12.63□□□□□ -0.39
AP3S2P59780 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.63□□□□□ -0.39
AP3S2P59780 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC12.63□□□□□ -0.39
AP3S2P59780 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
AP3S2P59780 Z83851.2-201ENST00000609564 659 ntBASIC12.63□□□□□ -0.39
AP3S2P59780 MIR7706-201ENST00000613747 67 ntBASIC12.63□□□□□ -0.39
AP3S2P59780 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
AP3S2P59780 AC116407.3-201ENST00000623905 1129 ntBASIC12.63□□□□□ -0.39
AP3S2P59780 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.63□□□□□ -0.39
AP3S2P59780 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.63□□□□□ -0.39
AP3S2P59780 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S2P59780 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.63□□□□□ -0.39
AP3S2P59780 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.63□□□□□ -0.39
AP3S2P59780 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
AP3S2P59780 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S2P59780 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S2P59780 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S2P59780 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S2P59780 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S2P59780 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S2P59780 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S2P59780 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S2P59780 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S2P59780 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S2P59780 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S2P59780 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S2P59780 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S2P59780 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
AP3S2P59780 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.62□□□□□ -0.39
AP3S2P59780 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S2P59780 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC12.62□□□□□ -0.39
AP3S2P59780 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC12.62□□□□□ -0.39
AP3S2P59780 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S2P59780 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S2P59780 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.62□□□□□ -0.39
AP3S2P59780 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.62□□□□□ -0.39
AP3S2P59780 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.62□□□□□ -0.39
AP3S2P59780 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S2P59780 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S2P59780 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
AP3S2P59780 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
AP3S2P59780 AL136172.1-201ENST00000598590 1394 ntBASIC12.62□□□□□ -0.39
AP3S2P59780 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
AP3S2P59780 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S2P59780 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S2P59780 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S2P59780 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S2P59780 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S2P59780 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
AP3S2P59780 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.62□□□□□ -0.39
AP3S2P59780 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC12.62□□□□□ -0.39
AP3S2P59780 RPL13P2-201ENST00000440687 659 ntBASIC12.62□□□□□ -0.39
AP3S2P59780 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.62□□□□□ -0.39
AP3S2P59780 SERBP1P3-201ENST00000459980 809 ntBASIC12.62□□□□□ -0.39
AP3S2P59780 KRT18P21-201ENST00000515767 1272 ntBASIC12.62□□□□□ -0.39
AP3S2P59780 SDHD-206ENST00000528182 754 ntTSL 3 BASIC12.62□□□□□ -0.39
AP3S2P59780 SLC25A39P2-201ENST00000537614 270 ntBASIC12.62□□□□□ -0.39
AP3S2P59780 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC12.62□□□□□ -0.39
AP3S2P59780 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
AP3S2P59780 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.62□□□□□ -0.39
AP3S2P59780 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.62□□□□□ -0.39
AP3S2P59780 AC026150.2-201ENST00000564693 1156 ntBASIC12.62□□□□□ -0.39
AP3S2P59780 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC12.62□□□□□ -0.39
AP3S2P59780 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.62□□□□□ -0.39
AP3S2P59780 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.62□□□□□ -0.39
AP3S2P59780 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.62□□□□□ -0.39
AP3S2P59780 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.62□□□□□ -0.39
AP3S2P59780 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
AP3S2P59780 AC084121.4-201ENST00000641598 221 ntBASIC12.62□□□□□ -0.39
AP3S2P59780 AF228730.8-201ENST00000642140 221 ntBASIC12.62□□□□□ -0.39
AP3S2P59780 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S2P59780 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
AP3S2P59780 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S2P59780 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S2P59780 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S2P59780 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms