Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.5□□□□□ -0.25
CLDN20P56880 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN20P56880 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN20P56880 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN20P56880 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN20P56880 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.5□□□□□ -0.25
CLDN20P56880 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN20P56880 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CLDN20P56880 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.5□□□□□ -0.25
CLDN20P56880 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN20P56880 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN20P56880 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.5□□□□□ -0.25
CLDN20P56880 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CLDN20P56880 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.5□□□□□ -0.25
CLDN20P56880 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.5□□□□□ -0.25
CLDN20P56880 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.5□□□□□ -0.25
CLDN20P56880 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.5□□□□□ -0.25
CLDN20P56880 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN20P56880 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN20P56880 MIR4741-201ENST00000579822 90 ntBASIC13.5□□□□□ -0.25
CLDN20P56880 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN20P56880 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.5□□□□□ -0.25
CLDN20P56880 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN20P56880 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.5□□□□□ -0.25
CLDN20P56880 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN20P56880 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN20P56880 AC020910.5-201ENST00000623668 1865 ntBASIC13.5□□□□□ -0.25
CLDN20P56880 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CLDN20P56880 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN20P56880 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN20P56880 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.5□□□□□ -0.25
CLDN20P56880 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN20P56880 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN20P56880 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN20P56880 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN20P56880 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN20P56880 AC105206.1-202ENST00000314927 2368 ntBASIC13.5□□□□□ -0.25
CLDN20P56880 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CLDN20P56880 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN20P56880 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN20P56880 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN20P56880 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN20P56880 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN20P56880 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN20P56880 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN20P56880 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN20P56880 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CLDN20P56880 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CLDN20P56880 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN20P56880 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.49□□□□□ -0.25
CLDN20P56880 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CLDN20P56880 AC087386.2-201ENST00000623212 4637 ntBASIC13.49□□□□□ -0.25
CLDN20P56880 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CLDN20P56880 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CLDN20P56880 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN20P56880 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN20P56880 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN20P56880 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN20P56880 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN20P56880 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.49□□□□□ -0.25
CLDN20P56880 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN20P56880 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CLDN20P56880 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN20P56880 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.49□□□□□ -0.25
CLDN20P56880 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.49□□□□□ -0.25
CLDN20P56880 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.49□□□□□ -0.25
CLDN20P56880 C2orf69P2-201ENST00000562032 1123 ntBASIC13.49□□□□□ -0.25
CLDN20P56880 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.49□□□□□ -0.25
CLDN20P56880 AP006547.1-201ENST00000563435 692 ntBASIC13.49□□□□□ -0.25
CLDN20P56880 DUX4L45-201ENST00000566406 1057 ntBASIC13.49□□□□□ -0.25
CLDN20P56880 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.49□□□□□ -0.25
CLDN20P56880 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN20P56880 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN20P56880 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.49□□□□□ -0.25
CLDN20P56880 AC073413.1-201ENST00000603927 732 ntBASIC13.49□□□□□ -0.25
CLDN20P56880 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN20P56880 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN20P56880 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN20P56880 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.49□□□□□ -0.25
CLDN20P56880 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN20P56880 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CLDN20P56880 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN20P56880 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN20P56880 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN20P56880 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN20P56880 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN20P56880 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN20P56880 AC011840.2-201ENST00000563063 1520 ntBASIC13.49□□□□□ -0.25
CLDN20P56880 REXO1L6P-201ENST00000603433 1515 ntBASIC13.49□□□□□ -0.25
CLDN20P56880 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN20P56880 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CLDN20P56880 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.48□□□□□ -0.25
CLDN20P56880 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CLDN20P56880 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
CLDN20P56880 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN20P56880 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN20P56880 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN20P56880 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN20P56880 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.48□□□□□ -0.25
CLDN20P56880 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms