Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDH8P55286 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH8P55286 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH8P55286 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CDH8P55286 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH8P55286 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CDH8P55286 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH8P55286 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH8P55286 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH8P55286 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CDH8P55286 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH8P55286 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.59■□□□□ 0.09
CDH8P55286 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.59■□□□□ 0.09
CDH8P55286 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH8P55286 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH8P55286 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.59■□□□□ 0.09
CDH8P55286 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH8P55286 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH8P55286 MIR1247-201ENST00000408206 136 ntBASIC15.59■□□□□ 0.09
CDH8P55286 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.59■□□□□ 0.09
CDH8P55286 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH8P55286 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH8P55286 AC099548.2-209ENST00000480264 625 ntBASIC15.59■□□□□ 0.09
CDH8P55286 AC006122.1-201ENST00000493323 440 ntBASIC15.59■□□□□ 0.09
CDH8P55286 AP001258.2-201ENST00000529891 490 ntBASIC15.59■□□□□ 0.09
CDH8P55286 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.59■□□□□ 0.09
CDH8P55286 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.59■□□□□ 0.09
CDH8P55286 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.59■□□□□ 0.09
CDH8P55286 AC090164.2-201ENST00000611487 516 ntBASIC15.59■□□□□ 0.09
CDH8P55286 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.59■□□□□ 0.09
CDH8P55286 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
CDH8P55286 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.59■□□□□ 0.09
CDH8P55286 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
CDH8P55286 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
CDH8P55286 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH8P55286 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH8P55286 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH8P55286 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH8P55286 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.59■□□□□ 0.09
CDH8P55286 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CDH8P55286 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH8P55286 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH8P55286 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.59■□□□□ 0.09
CDH8P55286 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.59■□□□□ 0.09
CDH8P55286 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.59■□□□□ 0.09
CDH8P55286 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH8P55286 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.59■□□□□ 0.09
CDH8P55286 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH8P55286 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH8P55286 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH8P55286 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CDH8P55286 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.58■□□□□ 0.09
CDH8P55286 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
CDH8P55286 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CDH8P55286 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CDH8P55286 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.58■□□□□ 0.09
CDH8P55286 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.58■□□□□ 0.09
CDH8P55286 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDH8P55286 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH8P55286 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH8P55286 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDH8P55286 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.58■□□□□ 0.08
CDH8P55286 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CDH8P55286 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CDH8P55286 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDH8P55286 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH8P55286 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CDH8P55286 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH8P55286 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.58■□□□□ 0.08
CDH8P55286 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH8P55286 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CDH8P55286 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDH8P55286 GPAA1P2-201ENST00000417923 928 ntBASIC15.58■□□□□ 0.08
CDH8P55286 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.58■□□□□ 0.08
CDH8P55286 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.58■□□□□ 0.08
CDH8P55286 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.58■□□□□ 0.08
CDH8P55286 AC005740.2-201ENST00000511085 419 ntBASIC15.58■□□□□ 0.08
CDH8P55286 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
CDH8P55286 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDH8P55286 SNORD3B-2-202ENST00000571722 791 ntBASIC15.58■□□□□ 0.08
CDH8P55286 MIR3615-201ENST00000581999 87 ntBASIC15.58■□□□□ 0.08
CDH8P55286 AC090505.1-201ENST00000430515 1834 ntBASIC15.58■□□□□ 0.08
CDH8P55286 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH8P55286 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH8P55286 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CDH8P55286 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
CDH8P55286 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDH8P55286 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CDH8P55286 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.58■□□□□ 0.08
CDH8P55286 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.58■□□□□ 0.08
CDH8P55286 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDH8P55286 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CDH8P55286 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.58■□□□□ 0.08
CDH8P55286 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH8P55286 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH8P55286 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH8P55286 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH8P55286 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CDH8P55286 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
CDH8P55286 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms