Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NEDD4P46934 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.14■□□□□ 0.33
NEDD4P46934 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.14■□□□□ 0.33
NEDD4P46934 XBP1P1-201ENST00000436573 652 ntBASIC17.14■□□□□ 0.33
NEDD4P46934 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NEDD4P46934 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.14■□□□□ 0.33
NEDD4P46934 BX284668.4-201ENST00000453917 508 ntBASIC17.14■□□□□ 0.33
NEDD4P46934 RCC2P8-201ENST00000502779 1035 ntBASIC17.14■□□□□ 0.33
NEDD4P46934 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.14■□□□□ 0.33
NEDD4P46934 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NEDD4P46934 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC17.14■□□□□ 0.33
NEDD4P46934 PGAM1P5-201ENST00000548011 764 ntBASIC17.14■□□□□ 0.33
NEDD4P46934 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC17.14■□□□□ 0.33
NEDD4P46934 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC17.14■□□□□ 0.33
NEDD4P46934 AC124068.2-201ENST00000569473 1109 ntBASIC17.14■□□□□ 0.33
NEDD4P46934 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NEDD4P46934 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC17.14■□□□□ 0.33
NEDD4P46934 AC020914.3-201ENST00000594712 304 ntBASIC17.14■□□□□ 0.33
NEDD4P46934 AC026740.1-201ENST00000607068 791 ntBASIC17.14■□□□□ 0.33
NEDD4P46934 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.14■□□□□ 0.33
NEDD4P46934 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
NEDD4P46934 CICP4-201ENST00000447359 2812 ntBASIC17.14■□□□□ 0.33
NEDD4P46934 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC17.14■□□□□ 0.33
NEDD4P46934 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
NEDD4P46934 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC17.14■□□□□ 0.33
NEDD4P46934 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC17.14■□□□□ 0.33
NEDD4P46934 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NEDD4P46934 RAN-210ENST00000541630 1475 ntTSL 2 BASIC17.13■□□□□ 0.33
NEDD4P46934 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NEDD4P46934 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NEDD4P46934 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NEDD4P46934 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
NEDD4P46934 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
NEDD4P46934 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC17.13■□□□□ 0.33
NEDD4P46934 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NEDD4P46934 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
NEDD4P46934 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NEDD4P46934 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NEDD4P46934 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NEDD4P46934 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NEDD4P46934 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NEDD4P46934 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NEDD4P46934 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
NEDD4P46934 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC17.13■□□□□ 0.33
NEDD4P46934 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NEDD4P46934 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NEDD4P46934 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC17.13■□□□□ 0.33
NEDD4P46934 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NEDD4P46934 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NEDD4P46934 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NEDD4P46934 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
NEDD4P46934 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC17.13■□□□□ 0.33
NEDD4P46934 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.13■□□□□ 0.33
NEDD4P46934 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.13■□□□□ 0.33
NEDD4P46934 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.13■□□□□ 0.33
NEDD4P46934 EIF4HP1-201ENST00000453115 687 ntBASIC17.13■□□□□ 0.33
NEDD4P46934 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NEDD4P46934 AC125604.1-201ENST00000496255 707 ntBASIC17.13■□□□□ 0.33
NEDD4P46934 SCARNA20.5-201ENST00000516991 142 ntBASIC17.13■□□□□ 0.33
NEDD4P46934 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.13■□□□□ 0.33
NEDD4P46934 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.13■□□□□ 0.33
NEDD4P46934 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
NEDD4P46934 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.13■□□□□ 0.33
NEDD4P46934 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
NEDD4P46934 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC17.13■□□□□ 0.33
NEDD4P46934 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
NEDD4P46934 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC17.13■□□□□ 0.33
NEDD4P46934 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NEDD4P46934 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC17.13■□□□□ 0.33
NEDD4P46934 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NEDD4P46934 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NEDD4P46934 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NEDD4P46934 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NEDD4P46934 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NEDD4P46934 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
NEDD4P46934 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NEDD4P46934 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NEDD4P46934 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NEDD4P46934 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NEDD4P46934 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NEDD4P46934 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NEDD4P46934 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NEDD4P46934 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NEDD4P46934 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NEDD4P46934 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NEDD4P46934 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NEDD4P46934 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NEDD4P46934 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC17.12■□□□□ 0.33
NEDD4P46934 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NEDD4P46934 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC17.12■□□□□ 0.33
NEDD4P46934 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC17.12■□□□□ 0.33
NEDD4P46934 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NEDD4P46934 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.12■□□□□ 0.33
NEDD4P46934 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
NEDD4P46934 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
NEDD4P46934 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NEDD4P46934 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NEDD4P46934 SLC16A6P1-201ENST00000413214 1059 ntBASIC17.12■□□□□ 0.33
NEDD4P46934 ACTG1P2-201ENST00000415776 1125 ntBASIC17.12■□□□□ 0.33
NEDD4P46934 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms