Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
NKX2-1P43699 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
NKX2-1P43699 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NKX2-1P43699 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NKX2-1P43699 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
NKX2-1P43699 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NKX2-1P43699 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
NKX2-1P43699 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
NKX2-1P43699 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.07□□□□□ -0.48
NKX2-1P43699 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
NKX2-1P43699 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NKX2-1P43699 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.06□□□□□ -0.48
NKX2-1P43699 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.06□□□□□ -0.48
NKX2-1P43699 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.06□□□□□ -0.48
NKX2-1P43699 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
NKX2-1P43699 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 AC072061.1-201ENST00000569710 2234 ntBASIC12.06□□□□□ -0.48
NKX2-1P43699 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.06□□□□□ -0.48
NKX2-1P43699 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 AGAP10P-201ENST00000454844 2418 ntBASIC12.06□□□□□ -0.48
NKX2-1P43699 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.06□□□□□ -0.48
NKX2-1P43699 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
NKX2-1P43699 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.06□□□□□ -0.48
NKX2-1P43699 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC12.06□□□□□ -0.48
NKX2-1P43699 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.06□□□□□ -0.48
NKX2-1P43699 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.06□□□□□ -0.48
NKX2-1P43699 GAPDHP40-201ENST00000505218 1006 ntBASIC12.06□□□□□ -0.48
NKX2-1P43699 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.06□□□□□ -0.48
NKX2-1P43699 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.06□□□□□ -0.48
NKX2-1P43699 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
NKX2-1P43699 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.06□□□□□ -0.48
NKX2-1P43699 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
NKX2-1P43699 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
NKX2-1P43699 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.06□□□□□ -0.48
NKX2-1P43699 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.06□□□□□ -0.48
NKX2-1P43699 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
NKX2-1P43699 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.06□□□□□ -0.48
NKX2-1P43699 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.06□□□□□ -0.48
NKX2-1P43699 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
NKX2-1P43699 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.06□□□□□ -0.48
NKX2-1P43699 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX2-1P43699 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
NKX2-1P43699 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.05□□□□□ -0.48
NKX2-1P43699 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
NKX2-1P43699 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NKX2-1P43699 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.05□□□□□ -0.48
NKX2-1P43699 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NKX2-1P43699 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NKX2-1P43699 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
NKX2-1P43699 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NKX2-1P43699 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
NKX2-1P43699 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
NKX2-1P43699 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.05□□□□□ -0.48
NKX2-1P43699 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
NKX2-1P43699 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
NKX2-1P43699 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NKX2-1P43699 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
NKX2-1P43699 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.05□□□□□ -0.48
NKX2-1P43699 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.05□□□□□ -0.48
NKX2-1P43699 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
NKX2-1P43699 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms